| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4141 |
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| Symbol | |
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| ID | 6245669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1131262 |
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| End bp | 1132200 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595901 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001860308 |
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| Protein GI | 186472966 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.812185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC CGCTTCCCTC GCTGAGCGAC CTGGTTGTCG AACGGGTCGG CTTCGGCATT
TTCGTTCTCG ACCGTCAGAT GAACGTGCTG ATGTGGAATC GCTTCATGCA CGATCACAGC
GGGTTGTCGG CCGAACAGGT GGTCGGCAAG TCGATTTTCG CGAGCTTTCC GGAACTGCCG
CGCGTGTGGC TTACGCGTAA GCTCGAAAGC GTGTTCCAGC TGGGCAGCTT CGCGTTCAGT
TCGTGGGAGC AGCGCCCCTA TCTGTTCAAG TTCGATCATG ATCGGCCGAT TACGGGCGGC
GTCGATTTCA TGCAGCAGGA CTGCACTTTC ATGCCGATCA TGCGCGATCG CGAAGTAGAG
GCCGTATGCG TGACGGTATC CGACGTGACG CATGTGAGCA TCATGCAGCG CGAGCGTGAA
GAAGCCGTCG CGAAGCTGCA GGAATATGCG GACCGCGACG GCCTGACGGG CATCGCGAAC
CGCCGCTACT TCGAAGCGCG TCTGCGCGAT GAATACACGC GCTGGCAGCG CTACGGCGGC
GAACTGTCGA TCCTGTTGTT CGATCTGGAT CACTTCAAGA AGATCAACGA CCAGTTCGGC
CACGTGGTCG GCGATACCGT GTTGCGGGAA ATGGCGCAGC GCGTCGCGCA TGTGGTTCGC
GCGCAAGATA CGTTCGGGCG CTTCGGTGGC GAGGAGTTCG CGTTGCTGCT GCCGTGCACG
CCGCTGGAAG ACGCGATGCT GGTCGCGGAG AAGATCCGCA ATACGATCGG CGACCGGCCC
GTGGACGTGC AAGGCGTCAA TGTGCCCGTG ACGGCGAGCG TCGGCGGCGC GGCTGCTCGG
GCCGGGGTGC CCGCTTACGA AGCGCTCATC AACGAGGCCG ACGCTGCGCT GTACAGCGCG
AAGCGGCAAG GGCGCAACCG GTCGGTTGCG TTCATCTGA
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| Protein sequence | MNAPLPSLSD LVVERVGFGI FVLDRQMNVL MWNRFMHDHS GLSAEQVVGK SIFASFPELP
RVWLTRKLES VFQLGSFAFS SWEQRPYLFK FDHDRPITGG VDFMQQDCTF MPIMRDREVE
AVCVTVSDVT HVSIMQRERE EAVAKLQEYA DRDGLTGIAN RRYFEARLRD EYTRWQRYGG
ELSILLFDLD HFKKINDQFG HVVGDTVLRE MAQRVAHVVR AQDTFGRFGG EEFALLLPCT
PLEDAMLVAE KIRNTIGDRP VDVQGVNVPV TASVGGAAAR AGVPAYEALI NEADAALYSA
KRQGRNRSVA FI
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