| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4138 |
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| Symbol | |
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| ID | 6245666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1128112 |
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| End bp | 1129389 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642595898 |
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| Product | squalene-associated FAD-dependent desaturase |
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| Protein accession | YP_001860305 |
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| Protein GI | 186472963 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAGC TGGTTCACGT GATCGGCGCA GGGCTGGCCG GTCTCGCCGC CGCCGTGCAA
CTGCAGCGGC GCGGCGCGCA GGTCGTGCTG TACGAAGCGG CCGAGCAGGC TGGTGGTCGC
TGCCGCACGT ATTACGACCG CGCACTGGCG GCGACTGTCG ACAGCGGCAA CCATCTCGTG
CTGTCGGGCC AGCAGGCCAC ATTGAACTAC GTTCGCGCCA TCGGTTCCGC TGAAGATCTC
GTTGGGCCGA CGCAGCCCGA ATACCCGTTC GTCGACCTCG CGACGAACCA GCGCTGGGCC
GTGCGGATGT CGCAAGGGCG ACTCCCGGCG TGGATCTTCG AGGCCGGCGC GCGCGTGCCG
GACACGCAGT GGACGGACTA TCTGTCCGTC GTGCCGCTGC TGCTTGCCAA GCCGGGCCGC
AACGTCGCGC AGACGATGCG CAGCAACGGC CCGCTATGGG ACCGCATGCT GCGCCCGCTG
CTGCTGGCAA TGACGAACGT CGACCCGCGC CACGCGACGG CCGAACTCGC AGGCGCCGCA
CTGCGCGACA CCTTCGTGAC AGGCGGCCCG GCCAGCCGCG CGCTTGTCGC GCGCAATGGA
TTGGGCTCGG CATTCGTCGA CCCGGCGCTG CGGCTGTTGC AGCACGGGGG CGCGGCGATC
CGGCTCGGCG CGCGGATCGA TGGACTCGAG TTCTCCGATG GCGACGACGG CCGGCGTGTC
GCCTCGCTGC GGCTGAACGC GGAGGAGCGC ATCGAAATCG GCGCAAACGA AGCTGTCGTG
CTGGCTGTGA CGCCCGATGT GGCGCAGTCG CTTGTGCCTG GCATGCAGGC GCCGCGCCGC
TTTTCGGCGA TAGTGACGGC GCATTTTGCC GTCGAACCGC CGCTCGGCCA TCCGCCGCTG
ATGGGGCTCG TCAACGCAAC CGCGAACTGG CTGGTAGCGT CGGACGGGCG TCTTTCGGTG
ACGGTTTACG ATGCGGCGCG CCTCACCGAT ATGCCGCGTG ATGACCTCGC GCGCAAGCTG
TGGGCCGACG TCGCGCAAGT GACAGGCTTG TCGGCCGACC TGCCGCTCAA GTGGCAATTG
ATTGTCGAGC CGCGCGCCAC TTTCGCCGCG CAGCCCGACG AGGAGATGCG CCGCCCGGCC
ACGCGCACTC GCTGGAACAA CCTGATGCTC GCAGGCGACT GGACGGCAAC CGGTCTGCCG
CCGGGCATCG AAGGGGCGAT CCGCTCAGGC CAGAAGGCCG CGGATACGCT ATTGAACGAA
CCGATGGAAC GCCGATGA
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| Protein sequence | MRKLVHVIGA GLAGLAAAVQ LQRRGAQVVL YEAAEQAGGR CRTYYDRALA ATVDSGNHLV
LSGQQATLNY VRAIGSAEDL VGPTQPEYPF VDLATNQRWA VRMSQGRLPA WIFEAGARVP
DTQWTDYLSV VPLLLAKPGR NVAQTMRSNG PLWDRMLRPL LLAMTNVDPR HATAELAGAA
LRDTFVTGGP ASRALVARNG LGSAFVDPAL RLLQHGGAAI RLGARIDGLE FSDGDDGRRV
ASLRLNAEER IEIGANEAVV LAVTPDVAQS LVPGMQAPRR FSAIVTAHFA VEPPLGHPPL
MGLVNATANW LVASDGRLSV TVYDAARLTD MPRDDLARKL WADVAQVTGL SADLPLKWQL
IVEPRATFAA QPDEEMRRPA TRTRWNNLML AGDWTATGLP PGIEGAIRSG QKAADTLLNE
PMERR
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