| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4137 |
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| Symbol | |
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| ID | 6245665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1126082 |
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| End bp | 1128115 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642595897 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_001860304 |
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| Protein GI | 186472962 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT TATCCATGAC CCAGACGCTG GGCGAAGTAC TGCCTCAAAC GCTGATCGAC
GATCATGCTC CCGTTGCAGC CGCGCTGGCG ACGGGCGCCG CACCCGTCGA TGCGCTCGAC
GCCGCCGTCA CGCGCGCCAC GGAGGCGATC CTTGCGGTGC AAAAAGACGA CGGCCACTGG
GTCTACGAAC TCGAAGCCGA CGCGACGATT CCCGCCGAAT ACGTGCTGCT CGTCCACTTC
CTGGGCGAAA CGCCGAACCT CGAACTCGAA CAGAAGATCG CGCGCTATCT GCGCCGCATC
CAGTTGCCCA ACGGCGGCTG GCCGCTCTTC ACGGACGGCG CGATGGACGT CAGCGCGAGC
GTCAAGGCGT ACTTCGCGCT GAAGATGATC GGCGATCCGG AAGACGCCGC GCACATGGTC
CGCGCGCGCG AGTGCATTCT CGCGAACGGC GGCGCGGAAG CGGCGAACGT GTTCACGCGC
ATCCTGCTCG CGCTATTCGG CGTGGTCACG TGGTACGCCG TGCCGATGAT GCCCGTCGAA
ATCATGCTGC TGCCCAAGTG GTTCCCGTTC CACCTGTCCA AGGTGTCGTA TTGGGCGCGC
ACGGTGATCG TGCCGCTGCT CGTGCTGAAC GCGAAACGGC CTGTCGCGCG CAATCCGCGC
GGCGTGCGCA TCGACGAGCT GTTCCGCGGC GCGCCCGTCA CGACGGGTCT GCTGCCGCGC
TCGGGTCACC AGAGCAAGAG CTGGTTCGCG TTCTTCCGCG CCGTCGACGG CGTGCTGCGC
GTAACAGATG GCCTGTTCCC GAAAGCATCG CGCGAGCGCG CGATCAAGGC GGCCGTCAGC
TTCGTCGATG AACGCCTGAA CGGCGTGGAC GGCCTCGGCG CGATTTTCCC GGCGATGGCG
AACTCGGTGA TGATGTACGA CGTGCTCGGC TACCCCGCCG ACCACCCGAA TCGCGCGATC
GCCCGCGAGT CGATCGAAAA ACTGCTCGTC GTCCACGAAG ACGAGGCGTA TTGCCAGCCG
TGTCTGTCGC CCGTGTGGGA CACATCCCTT GCGGCGCACG CGCTGCTCGA AACGGGCGAC
GCGCGCGCCG AAGAAGCCGC CGAACGCGGC CTCGCCTGGC TGCGTCCGCT ACAGATCCTC
GATGTGCGCG GCGACTGGAT TTCGCGTCGT CCCGACGTGC GGCCGGGTGG CTGGGCGTTC
CAGTACAACA ACGCACATTA CCCAGATGTC GACGATACGG CCGTCGTCGC GATGGCGATG
CACCGTTCGG CGGCAGTCAC GAACTCGAAC GTCGATGCCA ACGCGATTGC GCGCGCCCGC
GAATGGGTGG TCGGCATGCA AAGCAGCGAC GGCGGCTGGG GCGCGTTCGA GCCGGAAAAC
ACGCAGTACT ACTTGAACAA TATCCCGTTC TCGGATCATG GAGCGCTGCT CGATCCGCCC
ACGGCCGACG TGTCAGGCCG TTGCCTGTCG ATGCTCGCGC AACTCGGCGA GATGCCCGCG
ACCAGTGAGC CCGCCCGCCG CGCATACGAC TATCTGCTGA AGGAGCAGGA AGACGACGGC
AGCTGGTACG GCCGGTGGGG CATGAACTAC ATCTACGGCA CGTGGACGGC GCTGTGCGCG
CTCAACGCAG CGGGCATCTC GCTCGAAGAC GCGCGCATCA AGCGCGCCGC GCAGTGGCTG
GTGTCGATCC AGAACGCGGA CGGCGGCTGG GGTGAAGACG GCACGAGCTA CAAGCTCGAC
TATCGCGGCT ACGAAAAGGC GCCGAGTATT CCGTCGCAAA CCGCTTGGGC GCTGCTGGGC
CTGATGGCGG CCGGTTACGT CGATCATCCC GCCGTCGCGC GCGGTATCGA CTATCTGCAA
CGGGAACAGC GCGACCACGG GCTGTGGGAC GAAGAGCGCT TTTCGGCGAC GGGCTTCCCG
CGCGTCTTCT ATCTGCGCTA CCACGGTTAT CGCAAGTACT TCCCGCTGTG GGCGCTTGCG
CGCTACCGCA ACCTGAAGCG CACGGGCGAA AAGCGCGTCA CCGTCGGCAT GTAA
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| Protein sequence | MNDLSMTQTL GEVLPQTLID DHAPVAAALA TGAAPVDALD AAVTRATEAI LAVQKDDGHW
VYELEADATI PAEYVLLVHF LGETPNLELE QKIARYLRRI QLPNGGWPLF TDGAMDVSAS
VKAYFALKMI GDPEDAAHMV RARECILANG GAEAANVFTR ILLALFGVVT WYAVPMMPVE
IMLLPKWFPF HLSKVSYWAR TVIVPLLVLN AKRPVARNPR GVRIDELFRG APVTTGLLPR
SGHQSKSWFA FFRAVDGVLR VTDGLFPKAS RERAIKAAVS FVDERLNGVD GLGAIFPAMA
NSVMMYDVLG YPADHPNRAI ARESIEKLLV VHEDEAYCQP CLSPVWDTSL AAHALLETGD
ARAEEAAERG LAWLRPLQIL DVRGDWISRR PDVRPGGWAF QYNNAHYPDV DDTAVVAMAM
HRSAAVTNSN VDANAIARAR EWVVGMQSSD GGWGAFEPEN TQYYLNNIPF SDHGALLDPP
TADVSGRCLS MLAQLGEMPA TSEPARRAYD YLLKEQEDDG SWYGRWGMNY IYGTWTALCA
LNAAGISLED ARIKRAAQWL VSIQNADGGW GEDGTSYKLD YRGYEKAPSI PSQTAWALLG
LMAAGYVDHP AVARGIDYLQ REQRDHGLWD EERFSATGFP RVFYLRYHGY RKYFPLWALA
RYRNLKRTGE KRVTVGM
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