Gene Bphy_4118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4118 
Symbol 
ID6245647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1109015 
End bp1109764 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID642595879 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_001860286 
Protein GI186472944 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT GGTTAGTCAG CCTGCTCATG GTGGCCGCGA GTCACGCATG GGCGGCAACG 
TCGTGCACGG ATTTCGCGCC CAACGCCCAA TGGCCCGTGC TGACGAACGC GAAGATGACG
CCGAAGTCGC GCCTGCTTTG CTACTCGGAC TTCGCCGTTC TGCATTCGGG CATCACGCAC
GGCCCGTTAT GGTCCGCCGA GCATCTGACG CGCGACCATA TCGAAGCCGC GAAAGACATG
ACGCGCACCA ACAAGTTCTT CGAAGATGCG CGTCTGCCGG AAGGCGAAGG CGCGACGCTT
GCAGACTACA AGCGCAGTGG CTTCGATCGC GGTCACATGA GCCCGGCCGG CAACCGCTGG
AATCCGGAAG CAATGGCACA ATCGTTCTCG CTCGCGAACG TCGTGCCGCA GAACCGCGAG
AACAACCAGC ACTTGTGGTC GCGCCTCGAA ACGGCCGTCC GCCGGCTCGC CGTGAAATAC
GACGACACGT ATGTCGTCAC CGGCCCGATG TTCATCGGCT CGCAGCTGCA GACCATCGGA
CCGACACGCG TGTTCGTGCC GACGCAGCTG TTCAAGGTCG TCTACGTGCC GTCGAAGCAG
CTTGCGTTCG CGATCGTTGC GGACAACGTC GCCACCAATA GCTACGAGGT GAAATCGGTG
CATGAACTCG AAGCGATGAG CGGCATCCGC TTTCCGGGCA TTCCGGAAGG GTTGAAGGAC
CAGCGTCCGG GAGGGCTGAA AGGTGTTTAA
 
Protein sequence
MKKWLVSLLM VAASHAWAAT SCTDFAPNAQ WPVLTNAKMT PKSRLLCYSD FAVLHSGITH 
GPLWSAEHLT RDHIEAAKDM TRTNKFFEDA RLPEGEGATL ADYKRSGFDR GHMSPAGNRW
NPEAMAQSFS LANVVPQNRE NNQHLWSRLE TAVRRLAVKY DDTYVVTGPM FIGSQLQTIG
PTRVFVPTQL FKVVYVPSKQ LAFAIVADNV ATNSYEVKSV HELEAMSGIR FPGIPEGLKD
QRPGGLKGV