| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4097 |
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| Symbol | |
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| ID | 6245627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1090581 |
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| End bp | 1091885 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642595859 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_001860266 |
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| Protein GI | 186472924 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCGG CCGTGACGAC GGCTGCGACG CATCGTGCCA TCGAGGCAGT GTGGCGGATC
GAATCCGCGA AGGTCATCGC CCACGTCGCG CGGATCGTGC GCGACGTGGG CGTGGCCGAG
GAACTCGCGC AGGACGCGCT GGTGGCTGCG CTCGAAACGT GGCCGGACGC AGGCGTGCCC
GACAACCCCG GAGCGTGGCT GATGGCGACG GCGAAGAACC GCGCGCTCGA CCGCTGGCGT
CAGGATGCGC TGCACGCGCG CAAGCACGAA GAACTGGGCG CGGACATGGA CGCACGCGAG
GCCCATATCG TGCCCGATTT CGTCGACGCG CTCGACGCCG CGCGCGCCGA CGACATCGGC
GACGATCTGC TGCGGCTCGT GTTCACCGCC TGTCACCCGG TGCTTTCGAA GGACGCACGC
GTGTCGCTCA CGCTGCGCCT GCTGGGCGGC CTGACGACGG ACGAAATCGC GCGTGCGTTT
CTCGTGCCGG AGCCGACTAT CGCCCAGCGC ATCGTGCGCG CCAAGAAGAC GCTGTCGGCG
GCGAAGGTGC CGTTCGAGGT GCCGCAGGCG AACGATCGCG CCGTGCGGCT CGCGTCGGTG
CTCGAAGTGA TCTATCTGAT CTTTAACGAA GGCTATTCGG CCACGGCGGG CGACGACTGG
ATGCGCCCGG CGCTGTGCGA GGAAGCGCTG CGCCTCGGCC GCGTGCTGAC GGGGCTGATG
CCCGACGAAA GCGAAGTGCA CGGGCTCGCT GCGCTGATGG AGATTCAGGC GTCGCGCACG
CATGCGCGTG TCGATGCGCA AGGGCGGCCC GTTCTGCTGC TCGATCAGGA CCGCAGCCGT
TGGGACCCGC TTCTGATCCG GCGTGGACTG GCCGCGCTGG AGCGCTCCGA AGCGCTTGGC
GGCATGAGCG GTCCGTACAC GCTGCAGGCC GCGCTCGCCG CGTGCCACGC GCGCGCCCGC
ACGGCGGCCG ACACGGATTG GGCGCAGATC GTCGCGCTTT ACGATGCGCT CGCGGAAGTG
GCGCCGTCGC CCGTCGTCGA TCTGAACCGC GCGGTTGCTG TCGGCATGGC GTATGGGCCG
ATGGCGGCGC TGGAACTCGT CGATGCACTC GCTGGCGAGC CTTCGCTGAA GCACTATCAC
TGGCTGCCGA GCGTGCGCGG CGATCTGCTC GCCAAGCTCG GCCGCAACGC CGAAGCGCGC
ACGGAGTTCG AACGCGCCGC GTCGATGACC CGCAACGCGC GGGAACGCGA AATGCTGCTT
GAGCGCGCGC GCGAAATGAG CGGCGCGCAC GCACGCATGC AGTAA
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| Protein sequence | MRPAVTTAAT HRAIEAVWRI ESAKVIAHVA RIVRDVGVAE ELAQDALVAA LETWPDAGVP
DNPGAWLMAT AKNRALDRWR QDALHARKHE ELGADMDARE AHIVPDFVDA LDAARADDIG
DDLLRLVFTA CHPVLSKDAR VSLTLRLLGG LTTDEIARAF LVPEPTIAQR IVRAKKTLSA
AKVPFEVPQA NDRAVRLASV LEVIYLIFNE GYSATAGDDW MRPALCEEAL RLGRVLTGLM
PDESEVHGLA ALMEIQASRT HARVDAQGRP VLLLDQDRSR WDPLLIRRGL AALERSEALG
GMSGPYTLQA ALAACHARAR TAADTDWAQI VALYDALAEV APSPVVDLNR AVAVGMAYGP
MAALELVDAL AGEPSLKHYH WLPSVRGDLL AKLGRNAEAR TEFERAASMT RNAREREMLL
ERAREMSGAH ARMQ
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