| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4087 |
|---|
| Symbol | |
|---|
| ID | 6245617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1083194 |
|---|
| End bp | 1084696 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642595849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001860256 |
|---|
| Protein GI | 186472914 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGTT CACCTGCCGC AATGACGGCC GCGCCGCTGA GCGCCGCCGC GATCGCGCTG
AACCGGTTCG GCCTCGGCGC ACGTGCCGAT GAAACGCCGC CCGCCGATCC GAAGAACTGG
CTGCTGGCGC AGTTCGACGC GTATCAGCCC ATCCCTGCTG CATGGGCAGC ACAACCGACT
TCGCAGGCGA TCGCCGCGCA ACTTGCCGAT GAGCGCCAGC AGGCAATGGC CAACGCCGCG
AGTGCTGCAA AAGCCGCTGC AAGCGGCGCG AGCCCGAGCA GCCAGCCCAA CGCCGCCGCG
AACCGCGAAG ACGCCAAGGC CGCCCGCCAG GCCGCGAACA AGGCGGTGCG CATGGAATCG
CGCGACACCT ATCGCGCAGC CGTGAACGCG CGCGTCACAA GCGCGCTGAC GACGCCCGCG
CCTTTCGTCG AACGGCTGGT GCATTTCTGG GCGAATCACT TCGCCGTGTC GGTCGATAAA
GGCGCCGTCG CGCCATACGC CGGTGCGTTC GAAGCGGAGG CGATTCGTCC GCATGTGCTC
GGCCGCTTCG AAGACATGCT CGTCGCCGTC GAACGTCATC CCGCAATGCA GCTGTTTCTC
GACCAGACGC GCTCGGTCGG TCCCGGCAGC GTTGCCGCGA TGCGCGCTGC GCAACGCAAT
CCGAACCGCA AGCAAGGCCT CAACGAAAAC CTCGCGCGCG AAATCATGGA ACTGCACACG
CTCGGCGTAC GCAGCGGCTA CACGCAGGAC GACGTCACCG AGTTCGCCCG CGCGATGACG
GGCTGGAGCA TCGCTGCCGC GCAAGGGCCA CAACCCGGCA ACGCGCCGCC GGGCGCGTTC
GTCTTCCGCG CGCAACTGCA CGAGCCGGGC ACGCGGACCA TCATGGGCCG TCACTACGAT
CAGCCCGGCG AAGCGCAAAC GCTCGCGATC CTGCATGACC TGTCGACCGC GCCCGCTACC
GCGACGCATA TCGCGACCAA GCTCGCGCGG CACTTCGTGG CGGACGATCC GCCCCCCGAT
GTCGTCGAGC AACTGGCGAC AGCGTTCATG CGCAGCCGCG GCGACTTGCC GACCGTCTAT
CGCGCGCTGA TCGGAAGCGC TGCCGCGTGG TCGCCCGTCG CCGTCAAGTT CAAATCGCCG
TGGGAGTGGA CGATTTCGTC GCTGCGCGGC CTCGGCATGC GCGACCCGAA CGACAGCGCG
CGCACCGTAC AGATGGCGCC CATTCTCACG CAACTCGGTC AGCAGGTGTG GCGGCCTGGC
TCGCCCGCCG GTTATGACGA CATCGCCGCG AGCTGGGCCG CGCCCGATGC GCTCGTGCGG
CGCGTCGAGA TCGCGCAGCG TTTCGCGGCG CGTGTCGGCG ACCGGCTCGA TGCGCGCTCG
CTTGGACAGA CGCTGATGGC AGGTTCGCTC AGCGTGCCGA CGCAAGTCGC CGTGTCGCGT
GCGGAAAGCG CATCGACGGC GCTTGCGCTG CTACTGGTTT CGCCCGATTT CCAACGGAGA
TGA
|
|---|
| Protein sequence | MASSPAAMTA APLSAAAIAL NRFGLGARAD ETPPADPKNW LLAQFDAYQP IPAAWAAQPT
SQAIAAQLAD ERQQAMANAA SAAKAAASGA SPSSQPNAAA NREDAKAARQ AANKAVRMES
RDTYRAAVNA RVTSALTTPA PFVERLVHFW ANHFAVSVDK GAVAPYAGAF EAEAIRPHVL
GRFEDMLVAV ERHPAMQLFL DQTRSVGPGS VAAMRAAQRN PNRKQGLNEN LAREIMELHT
LGVRSGYTQD DVTEFARAMT GWSIAAAQGP QPGNAPPGAF VFRAQLHEPG TRTIMGRHYD
QPGEAQTLAI LHDLSTAPAT ATHIATKLAR HFVADDPPPD VVEQLATAFM RSRGDLPTVY
RALIGSAAAW SPVAVKFKSP WEWTISSLRG LGMRDPNDSA RTVQMAPILT QLGQQVWRPG
SPAGYDDIAA SWAAPDALVR RVEIAQRFAA RVGDRLDARS LGQTLMAGSL SVPTQVAVSR
AESASTALAL LLVSPDFQRR
|
|---|
| |