Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4077 |
Symbol | |
ID | 6245607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1075459 |
End bp | 1075995 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642595839 |
Product | transcription activator effector binding |
Protein accession | YP_001860246 |
Protein GI | 186472904 |
COG category | [S] Function unknown |
COG ID | [COG3708] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCGCGC AAGGCCATCT CGACAACATC GCACTCGTGG AGCCGATCAA AATGGACGAA TCTCTTCTTG CCCAGCTGGA GCCGCCGCGT TTCGTCGACG GTAAGCCTTT GCTGGTCGCC GGATCGAGCG AACGCTATAA CTGCCAAAGC GGTTCGGGCA TTCCGGCGCA ATGGCAGCGC TTCAACACGA TCTTCAAGAA AGTGCCCGGC CAGATCGGCA ACGTTGCGTA CGGCGTCTGC TACAACGCCG ACGACTCGGG CAATTTCGAT TACCTGTGCG GCGTCGAGGT CGGCGATTTC TCCGGCTTGC CCGGCGAATT GAGCCGCGTG CGCATCGGTG GGCAACGTTA CGCGGTGTTC ACGCACCGCG ATCACATCTC GACGATACGC CGCACCTGGA ACACGATCTG GAACACGTGG CTGCCAGAAA CGGGGCACGC GCCCGCCGAC GCGCCCAACT TCGAACGCTA CAGCGAGCAA TTCGATCCGG TAACGGGGGC GGGCGGCGTC GAAATCTGGC TACCGCTCAA AAACTGA
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Protein sequence | MRAQGHLDNI ALVEPIKMDE SLLAQLEPPR FVDGKPLLVA GSSERYNCQS GSGIPAQWQR FNTIFKKVPG QIGNVAYGVC YNADDSGNFD YLCGVEVGDF SGLPGELSRV RIGGQRYAVF THRDHISTIR RTWNTIWNTW LPETGHAPAD APNFERYSEQ FDPVTGAGGV EIWLPLKN
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