| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4052 |
|---|
| Symbol | |
|---|
| ID | 6245582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1047102 |
|---|
| End bp | 1047947 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642595814 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001860221 |
|---|
| Protein GI | 186472879 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000104088 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTTT TTTCGGCACG GATGGATGGC GCGAGCGGCA TGGCGAAGAC GGCAAAAGAC
GGCGAAACGG GCGCGGGCAA GCCGCAGCGC GGTATTCAGA GCGTCGAAGT GGGCGGACGG
GTGCTGCATG CGCTCGCGAA AGCCCGCGCG CCGCTCGCGC TATCCGATCT GGCCGCCGGC
GCCGACATCG CGCCGGGCCA GGCGCATGCG TACCTCGTGA GCCTCACGCG GCTCGGACTG
ATCAAACGCG ATGAGTTGAC GGGGCGCTAC GAGCCAGGTC CGCTGTCGTT GCGGCTTGGT
CTGATGCAGT TGGCGAACCA GCCTGCGTTT CGCGCGGCAG TGCCGCGCGT GGCGGCACTT
GCCGAGGCGA TCGGCTTCAG CGTCGCCATC TGCACGAGGG GGCCGCAAGG TCCGACCATC
GTTCGCTATG AGCACGCGGG CTTTCCGCTG CATGTAAACC TGCATGTGGG CACGGTGATG
TCGCTGCCCG CCACATCGAC GGGACGGGTG TTCTGTGCGT TCCTCGCAGC CGACGCATTG
CAGACGATGT GGGCGAACCA GTCGGGCGGC ACGGACGATA TGGTCGCGGC GGCGAATCGC
TCGTCATTCG ATGCGACGCT CGCTGCGATT CGCGAGCGCG GCATCGAACG GGGCATCGAT
GCGCCGAGTC CCGGCATCAG CAGTCTTGCC GCACCGGTGT TCGATGCCGA CGGGCAGTTG
TGCCTCGCGT TGACGGTCAT CGGGCCGAGC GGCGCGATCG ACGTGGATTG GAGCGGTCCC
ATTGCGCGCG GGCTCCACGA GACGGCTCGT GACATCGGCG CGGACATCGC ATCGCAACGA
ATATGA
|
|---|
| Protein sequence | MDLFSARMDG ASGMAKTAKD GETGAGKPQR GIQSVEVGGR VLHALAKARA PLALSDLAAG
ADIAPGQAHA YLVSLTRLGL IKRDELTGRY EPGPLSLRLG LMQLANQPAF RAAVPRVAAL
AEAIGFSVAI CTRGPQGPTI VRYEHAGFPL HVNLHVGTVM SLPATSTGRV FCAFLAADAL
QTMWANQSGG TDDMVAAANR SSFDATLAAI RERGIERGID APSPGISSLA APVFDADGQL
CLALTVIGPS GAIDVDWSGP IARGLHETAR DIGADIASQR I
|
|---|
| |