| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4021 |
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| Symbol | |
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| ID | 6245551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 999545 |
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| End bp | 1000900 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642595783 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001860190 |
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| Protein GI | 186472848 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.228244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA TCGAAACCAC CGAGCGCGAT ACGCCGCAAA CGCCGCAAAC GCCGCAAACG
CCGCAAACGC CGCAAACGCC GCAAACGCCG CAAACGCCGC AAACGCCGCA AGCGAAGCCC
GAAGCGGCGG CGGCCCCGGC TGCGGGCGCG GCGGAACCGA ATACGCGCAA GCGCAAGCTG
CTGCTGTCGC TGCTCGGCGT GGCCGTCGTC ACATCGGCTG CCGCGTACGG CGCGTACTAC
ATGACGGTTG CGCGCTACCA CGAGACCACG GACGACGCCT ACGTGAGCGG CAATCTCGTG
CAACTCACGC CGCAAGTGAC GGGCACCGTC ATCGCCGTGA ATGCCGACGA TACGCAGATC
GTGAAGATGG GCGACCCCGT CGTGAAACTC GACGATGCCG ATGCGAAGGT CGCGCTCGGA
AACGCAGAAG CGACGCTCGG GCAGACCGTT CGGCAAGTCA GCAGCCTGTA CGTGAACAAC
GATTTCTACG CGGCGAACGT CGCGCAGAAG CAATCGGATC TGGCGCGCGC GCAGGACGAT
CTGCGCCGCC GCCAGGCCGT CGCCGGCACG GGCGCAGTGT CCGCCGAAGA CATCGCCCAC
GCACGCGACA CCGTGACGGC CGCGCAGGCC GCGCTCGACG CTGCGCGTCA GCAGGCGCAA
GCGAACCGTG CTTTGACCGA TCGCACGACG GTCGCGCAGC ACCCGAACGT GCAGGCCGCG
GCGTCAAAGG TGCGCGACGC GTACCTCGCG TATGCGCGCA ACACGCTGCC CGCGCCTGTC
ACCGGGTATG TTGCAAAGCG TTCGGTGCAA GTCGGACAGC GTGTGTCGCC GGGCACGCCG
TTGATGGCCG TGGTGCCGCT CGACGGCGTA TGGGTCGACG CGAACTACAA GGAGAGCCAG
CTGCGCAACA TGCGCATCGG CCAGCCCGTC ATGCTGACGG CCGACGTGTA CGGCGGCAAG
GTTCGGTATC ACGGCCGCGT CGTCGGCTTC TCCGCCGGCA CGGGCAGCGC GTTCGCCACG
CTGCCCGCGC AGAACGCAAC GGGCAACTGG ATCAAGGTCG TGCAACGACT GCCCGCGCGC
ATCCAGCTCG ACGAGAAGGA ACTCGAAGCG CATCCACTGC GGATCGGACT GTCGATGGAA
GTCGACGTGG ATACGCGCGA CAACACGGGC GCGCAACTCG GCGCCGCCCT GAATACGACG
TATCGCACCG ACGTGTTTGC CGAATACGGC GCGCAGGCCG ACGCGGAGAT CGACAGGATC
ATCGCGCAGA ACATGGTGCC GACTCATGCG GAGTCCCGGC CGTTCGCCAA GCGCGAAACC
GGCGATAAAG CCGGCACGGC ACAGCACGCG GGCTAA
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| Protein sequence | MSEIETTERD TPQTPQTPQT PQTPQTPQTP QTPQTPQAKP EAAAAPAAGA AEPNTRKRKL
LLSLLGVAVV TSAAAYGAYY MTVARYHETT DDAYVSGNLV QLTPQVTGTV IAVNADDTQI
VKMGDPVVKL DDADAKVALG NAEATLGQTV RQVSSLYVNN DFYAANVAQK QSDLARAQDD
LRRRQAVAGT GAVSAEDIAH ARDTVTAAQA ALDAARQQAQ ANRALTDRTT VAQHPNVQAA
ASKVRDAYLA YARNTLPAPV TGYVAKRSVQ VGQRVSPGTP LMAVVPLDGV WVDANYKESQ
LRNMRIGQPV MLTADVYGGK VRYHGRVVGF SAGTGSAFAT LPAQNATGNW IKVVQRLPAR
IQLDEKELEA HPLRIGLSME VDVDTRDNTG AQLGAALNTT YRTDVFAEYG AQADAEIDRI
IAQNMVPTHA ESRPFAKRET GDKAGTAQHA G
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