Gene Bphy_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4008 
Symbol 
ID6245538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp982035 
End bp982802 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content61% 
IMG OID642595770 
ProductABC transporter related 
Protein accessionYP_001860177 
Protein GI186472835 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TCGATGCACT GACGGTGCGG TTCAAGACGG CGACAGGCGC CGTCGACGCC 
GTGCGCAACG CAAGCTTTCA TGTCGCGCAA GGCGAAGTGT TCGGCCTGGT AGGCGAATCA
GGCTCGGGAA AATCAACGAT CCTGCGCGCG CTGAGCGGAC TTGCGCCGAC TGCACAAGGC
ACGATGCGCA TCGCGCTGCC GGACGGACAG GCGCAAAAGC GCGGTGTGCA AATGGTCTTT
CAGGACCCAT ACGGCTCGCT GCATCCGCGC TTCACCGTCG ATCAGACGTT GCGCGAGCCG
TTGCGCATCA ATGGCATCGG GCAGCATGAA GAGCGTATCG TCAACGCGCT ACGCGAAGTG
GGACTCAACG CGTCGTTCCG GTTTCGCTAT CCGCATCAGT TGTCTGGCGG ACAGCGGCAG
CGTGTTGCCA TTGCGCGCGC GCTGATCGTC GAGCCGCATG TGCTGCTGCT CGACGAACCG
ACGTCGGCCC TCGACGTCTC CGTACAAGCC GAGATTCTGA ACCTGCTCAA GCGCCTGCAC
CACGAGCGCA ATCTGACGAT GATTCTCGTC AGCCACAATC TGGCCGTGGT CGGCTTTCTG
TGTTCGCGCG TCGCGATCAT GCGCAATGGC GAGATTGTCG AAGAACTCGA TATCGAGCGG
ATACGCGCGC AACAGGTCGA CAACGACTAT TCGCGCAGCC TGCTGCTTGC GACGGGTGGC
TATCAACGAA AAGCCATCGA AGCGATGGGG GTCGACACGT CGCCGTGA
 
Protein sequence
MIDVDALTVR FKTATGAVDA VRNASFHVAQ GEVFGLVGES GSGKSTILRA LSGLAPTAQG 
TMRIALPDGQ AQKRGVQMVF QDPYGSLHPR FTVDQTLREP LRINGIGQHE ERIVNALREV
GLNASFRFRY PHQLSGGQRQ RVAIARALIV EPHVLLLDEP TSALDVSVQA EILNLLKRLH
HERNLTMILV SHNLAVVGFL CSRVAIMRNG EIVEELDIER IRAQQVDNDY SRSLLLATGG
YQRKAIEAMG VDTSP