Gene Bphy_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4003 
Symbol 
ID6245533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp976855 
End bp977421 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content61% 
IMG OID642595765 
ProductD-alanyl-D-alanine dipeptidase 
Protein accessionYP_001860172 
Protein GI186472830 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACA AACAGCAACT GATCCACATC ACGCCGGAAA CGCATCGCGT CGAGCTCGAC 
CTCGCGTATG CGACGGCCAA CAATTTCACC GGCAAGCCGA TTTACAAAGA AGCGCACTGC
CTGTTGCTCG CGCCCGCCGA AGCGGGCTTG CGCAAAGCCG TCGAACTCGC GGACAGCATC
GGCATGAAGC TGCGCATTTT CGATGCGTAC CGGCCGCCGC AAGCGCAGCA GGTTCTGTGG
GACTTTCTGC CCGATCCGAC CTTCATCGCG GAACTGGGAC GCGGCTCGAA TCATAGCCGC
GGCACCGCGC TCGATCTGAC CTTGATCGAC AGCAACGGCG AGGCGCTCGA TATGGGCACG
GGCTTCGATG CGATGGTCAA GGAGTCCGAG CACTTCCACA AAGGCCTGCC GCAGCACGTG
CAGCGCAACC GGCTACTGCT GCTCGGCATC ATGCATGCGG CCGGCTTCAC GCATATCGCA
AGCGAGTGGT GGCATTACGA AATACCCGGC TCGCGCGCGC TGCCCATTAT CGACAATAGC
GAAAGCGGCC CGTTGAAACT GATGTAA
 
Protein sequence
MPDKQQLIHI TPETHRVELD LAYATANNFT GKPIYKEAHC LLLAPAEAGL RKAVELADSI 
GMKLRIFDAY RPPQAQQVLW DFLPDPTFIA ELGRGSNHSR GTALDLTLID SNGEALDMGT
GFDAMVKESE HFHKGLPQHV QRNRLLLLGI MHAAGFTHIA SEWWHYEIPG SRALPIIDNS
ESGPLKLM