| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4001 |
|---|
| Symbol | |
|---|
| ID | 6245531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 974076 |
|---|
| End bp | 975539 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642595763 |
|---|
| Product | catalase |
|---|
| Protein accession | YP_001860170 |
|---|
| Protein GI | 186472828 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAAT TGACGACTGC TTTTGGCGCA CCCGTTGTAG ACAACCAGAA CATTCAGACG
GCGGGGCCGC GTGGGCCTGC CTTGCTGCAG GACGTGTGGT TCCTCGAGAA ACTCGCGCAC
TTCGACCGCG AGGTGATCCC GGAGCGCCGC ATGCACGCGA AAGGCTCGGG CGCCTTCGGC
ACCTTCACGG TCACGCATGA CATCACCAGG TACACGCGCG CCAACATCTT TTCGCAGATC
GGCAAGAAGA CGGAACTGTT CACACGCTTC TCGACGGTCG CGGGTGAGCG CGGCGCTGCC
GATGCCGAAC GCGACATCCG CGGCTTCGCG ATCAAGTTCT ATACGGACCA AGGCAACTGG
GATCTCGTCG GCAACAACAC GCCTGTGTTC TTCCTGCGCG ATCCGCTGAA GTTTCCGGAC
CTGAACCATG CGGTCAAGCG CGATCCGCGC ACGGGCCTGC GCAGCGCCGA AAACAACTGG
GATTTCTGGA CGCAACTGCC GGAAGCGCTG CACCAGGTGA CGATAGTCAT GAGCGATCGT
GGCATTCCCA AATCGTTCCG CCATATGCAC GGTTTCGGCA GCCACACGTT CAGCTTCATC
AATGAGAACA AAGAGCGCTT CTGGGTGAAG TTCCACCTGC ATACACAGCA GGGCATCCAG
AACCTGTCGG ATGCGGAAGC TGCGGCGCTC GTCGGCGTCG ATCGCGAAAG CTCGCATCGC
GACCTGTACG AAGCGATCGA ACGGAAGGAG TTTCCGAAGT GGACGATGTA CGTGCAGGTG
ATGCCGGAGA AGGACGCGTC GAAGACGCCG TATAACCCGT TCGATCTGAC CAAGGTCTGG
CCGAAGAAGG ACTACCCGCT GATCGAAGTG GGCGTGATGG AACTGAACCG CAACGCGGAC
AACCATTTTG CCGACGTCGA GCAGGCCGCG TTCAATCCTG CGAACGTGGT GCCGGGCATC
AGCTTCTCGC CGGACAAGAT GCTGCAAGGA CGGCTGTTCT CGTATGGCGA TGCTCAGCGT
TATCGGCTAG GTGTCAATCA CAGCCTGATC CCCGTGAACG CGCCGCGGTG CCCCGTGCAC
AGCTATCACC GCGACGGCTT CATGCGCGTC GACGGCAACA TGGGCGGTGC GACGCCATAC
AACCCGAACA CGCGCGGCGA ATGGCTCGAT CAGCCCGATT TCAGCGAGCC GCCGCTGTCT
GTCGAAGGCG CCGCCGACCA CTGGAATCAC CGTGTCGATG ACGACTACTT CTCGCAGCCC
GGCAACCTGT TCCGCCTGAT GTCGGACGAG CAGAAGCAGA CGCTGTTCGA CAACACGGCG
CGCGCATTGG CGGGCGTGTC GGAGCCGGTC CAGAAGCTGC ATATCGAGCA CTGCACGAAG
GCTGATCCCG CATACGGGCA AGGCGTGGCG GCCGCGCTGG AGTCGGCGAA GAAGGGCAGT
GCGACGCCGA ATCGCGCGCT GTGA
|
|---|
| Protein sequence | MNKLTTAFGA PVVDNQNIQT AGPRGPALLQ DVWFLEKLAH FDREVIPERR MHAKGSGAFG
TFTVTHDITR YTRANIFSQI GKKTELFTRF STVAGERGAA DAERDIRGFA IKFYTDQGNW
DLVGNNTPVF FLRDPLKFPD LNHAVKRDPR TGLRSAENNW DFWTQLPEAL HQVTIVMSDR
GIPKSFRHMH GFGSHTFSFI NENKERFWVK FHLHTQQGIQ NLSDAEAAAL VGVDRESSHR
DLYEAIERKE FPKWTMYVQV MPEKDASKTP YNPFDLTKVW PKKDYPLIEV GVMELNRNAD
NHFADVEQAA FNPANVVPGI SFSPDKMLQG RLFSYGDAQR YRLGVNHSLI PVNAPRCPVH
SYHRDGFMRV DGNMGGATPY NPNTRGEWLD QPDFSEPPLS VEGAADHWNH RVDDDYFSQP
GNLFRLMSDE QKQTLFDNTA RALAGVSEPV QKLHIEHCTK ADPAYGQGVA AALESAKKGS
ATPNRAL
|
|---|
| |