| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4000 |
|---|
| Symbol | |
|---|
| ID | 6245530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 973495 |
|---|
| End bp | 973983 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642595762 |
|---|
| Product | sensor protein |
|---|
| Protein accession | YP_001860169 |
|---|
| Protein GI | 186472827 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1956] GAF domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAG CTACCATCAA TACAGCGCTG CCCAAGGCCG AGTTCTATCG GGAACTGACG
TCGCAGGCGC GCTCGTTGCT CGAAGGCGAA TCGAATCAGA TCGCCAATGC AGCGAATCTG
TCGGCGCTGA TCTTTCACAG CCTGCCGCAA GTGAACTGGG CGGGTTTCTA TTTCGCGCTA
GACGGCGAAC TGGTCATCGG TCCGTTTCAG GGCAAGCCCG CCTGTGTGCG CATTCCGATG
GGCCGCGGCG TATGCGGTCG TGCCGCGCAA GCGCTTGAGA CGCAAGTCGT GCCCGATGTC
GATGCGTTCC CCGGACATAT CGCGTGCGAT TCGGCGTCGC GCTCGGAGAT CGTGATTCCG
CTGCAGAAGG CGAACGGCGA ACTGGTCGGC GTGCTCGATA TCGACAGTCC CGTGCTTGAA
CGTTTCGACG ACGAAGACCG GCGCGGGCTC GAAGAACTCG CGAAGATCTT CGTCGCGTCG
CTGCGCTGA
|
|---|
| Protein sequence | MFEATINTAL PKAEFYRELT SQARSLLEGE SNQIANAANL SALIFHSLPQ VNWAGFYFAL
DGELVIGPFQ GKPACVRIPM GRGVCGRAAQ ALETQVVPDV DAFPGHIACD SASRSEIVIP
LQKANGELVG VLDIDSPVLE RFDDEDRRGL EELAKIFVAS LR
|
|---|
| |