| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3993 |
|---|
| Symbol | |
|---|
| ID | 6245523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 967721 |
|---|
| End bp | 969274 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595755 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_001860162 |
|---|
| Protein GI | 186472820 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.927932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACAC TACGAAGTCT TCTCGCGGCG TTCGCCGTCG CCTTGCTGAC TTCGTGCGCG
AGCCTCCCGC CACAGGCGGA CCGCGTGCAG ACCCACGCCG TCACCGGCAC GCAGGACACG
CGGCTCGGCG TGGCCTTCGC GCCGCAGGAA AAGCAGCATC CCGACGAGTC CGCGTTCCAC
CTGCTGCCGG ATGCCGTCAA TGCGCTGGTC GCGCGGCTTG TGCTCGCCGA AGCAGCGGAC
CGCACGCTCG ACCTGCAGTA CTACATCTGG CACGACGACC TGACGGGCCG CGGACTTGCG
GCGGCCGTGA TGCGCGCCGC CGACCGCGGC GTGCGCGTGC GGATCCTGCT CGACGATCTC
GGCACGAATG CCGACGACAA ACTGCTGCTC GCGCTCGACG CGCATCCCAA CGTGCAGATT
CGCCTCTTCA ATCCCGTCGC GAACCGCACG TTCAAGAAAC TCGGCATGGC CGCGGAGTTC
TTTCGCGTGA ACCGGCGCAT GCACAACAAG TCGATGATCG CGGACAACGA GGGCGCAATA
CTCGGCGGAC GCAATATCGG CGACGAGTAC TTCGGCGCAT CGACGGATGT CGCGTTCGGC
GATCTCGATG TGCTCGTGCA TGGTCCCGTC GTGCCCGAGG TATCGCAGGC ATTCGACCTT
TTCTGGAACT CCGCTGCGTC CTATCCGATC GACGCGCTGA TGGGCCGCAA GGCCGACGCC
GCAGCGCTGG CCGAGGTACG CAGCAAGCTC GACGCCTATC TCGTCTCCGA AGAAAACAAC
CCCTATGTAG TGGATGCGCG CGAGCGGCTC ACGCATGTCA TTCATTCACA GGACGCCGTG
TTTTCATGGG GCAAGGCCAC GCTGCTCTAC GACGACCCCG CGAAAATCAC GCGCTCGCCG
GGCGAAGCGG AAGGTCGCCT GATGACGCAA CTCAAGGCGC TCGACCTGCA GCCGACTCAA
CAAATGCTCG TCGTGTCGCC GTATTTCGTG CCCGGAAAAG AAGGGGTCGC GTGGCTTTCC
GGCCTGACGC AAAAGCACGT GCGCGTGACG GTGCTGACCA ATTCGCTCGC GGCCACGGAT
GTCGCCGCCG TGCATGCGGG TTATCAACGC TACCGCAAGG CGTTGCTCGA AGCCGGCGTG
CGCCTTTACG AGTTGAAGCC TGTCGCCGAC GACAAGACAG AAAACAAGAA GCATGTGTTC
GGCTCGTCGA AGGCTTCGCT GCATGCGAAA ACCTATGTAT TCGACCGCGA CAGCATCTTT
ATCGGCTCAA TGAATCTCGA TCCGCGCTCC GTCGAACTCA ATACGGAAAT CGGCGTGTAT
TGCGAAAGCG CGCCGGCCGC TGCGCAGGTG GTCGATACGC TGGAGCCGAG TCTCGATCGT
ATTGCGTGGC GGCTCGAATT GCGCCCGAAT CTGAACGGCA CGAGCAGCAT CGTCTGGCTC
GACACCGCGC CCGACGGCAC CGTGACAATA CTCGACAGCG AACCCGACGT GTCGGTGCTT
CGCAAGACGG GCGTCTGGCT AATGGGCATC TTGCCGATCG AGTCGCAGTT GTAG
|
|---|
| Protein sequence | MITLRSLLAA FAVALLTSCA SLPPQADRVQ THAVTGTQDT RLGVAFAPQE KQHPDESAFH
LLPDAVNALV ARLVLAEAAD RTLDLQYYIW HDDLTGRGLA AAVMRAADRG VRVRILLDDL
GTNADDKLLL ALDAHPNVQI RLFNPVANRT FKKLGMAAEF FRVNRRMHNK SMIADNEGAI
LGGRNIGDEY FGASTDVAFG DLDVLVHGPV VPEVSQAFDL FWNSAASYPI DALMGRKADA
AALAEVRSKL DAYLVSEENN PYVVDARERL THVIHSQDAV FSWGKATLLY DDPAKITRSP
GEAEGRLMTQ LKALDLQPTQ QMLVVSPYFV PGKEGVAWLS GLTQKHVRVT VLTNSLAATD
VAAVHAGYQR YRKALLEAGV RLYELKPVAD DKTENKKHVF GSSKASLHAK TYVFDRDSIF
IGSMNLDPRS VELNTEIGVY CESAPAAAQV VDTLEPSLDR IAWRLELRPN LNGTSSIVWL
DTAPDGTVTI LDSEPDVSVL RKTGVWLMGI LPIESQL
|
|---|
| |