Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3980 |
Symbol | |
ID | 6245510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 956822 |
End bp | 958651 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642595742 |
Product | allophanate hydrolase |
Protein accession | YP_001860149 |
Protein GI | 186472807 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.143923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAT TCGATCTGCG TCTGCCCGCT GTGCGGGCCG CGTATCGCGA AGGCCGCACC ACGCCGCGCG CACTGCTCTC CGCATTGCGC GAGCGCGCCG CGGCATTGAA CCCGGACTTC CATCTCTTCA TCCATCTGTT GAGCGACGCC GAAATCGAGC CTTATCTCGC CGCGCTGGAT GAACGCGACA TCGATTCGCT GCCGCTCTAT GGCGTGCCGT TCGCACTGAA GGACAACATC GATCTCGCCG GCATTCCGAC CACCGCCGCC TGCCCCGCGT TCGCGTACAC ACCGGACCAA TCGGCGACGC TCGTCGCGCA ATTGATCGCA CTCGGTGCGG TGCCCATCGG CAAGACGAAT CTCGATCAGT TCGCCACCGG CCTCAACGGC ACGCGTTCGC CGTATGGCAA GTGCCGCAAC AGCGTGCATG CCGGCTATCC GTCGGGCGGA TCGAGCGCGG GGTCGTCGCT GGCCGTGGCG CTGGGTGTCG CAAGCTTCGC GCTCGGCACG GATACGGCCG GCTCGGGCCG CGTGCCCGCC GCACTGAACA ACCTCGTCGG TACGAAGGGT ACGAAGGGCT TGCTGTCGAC GGCGGGCGTC GTGCCCGCGT GCCGCACGCT CGACTGCGTA ACCTACTTCA CGGCAACCGC GAGCGAGGCG AGTGAACTGC TTGCGCTCAC CGCCCGTCAC GATCCCGCCG ATGCGTATAG CCGCGCAAAT CCGCAATGGA ATGATGCGTC GGCATTCGGC GCCATCAAGG GCTTTCGCTT TGGCGTGCCC GCGCAACTCG AATTTGCCGG CTGCGACGAA AGCCCCGCGC TGTTCGCGCA GGCACGCGCG GCGCTCGAAA CAATCGGCGG CGAGGCCGTC GAAATCGACT TCGCGCCGTT TCTCGAAGCG GCGCGTCTGC TTTATGAAGG ACCGTGGGTC GCCGAGCGCT ACAGCGTGGC GGGCGCGTTG ATGGAATCGC AACCCGATGC GGTGTTGCCC GTGATTCGCG ACGTGCTCGC GAAAGCACCG GGCGCAACGG CCGTCGATGC GTTTCGCGCG CAATACCGGC TACAGGCGTT GAAGCAGTAT TGCGACGCCG TGCTTGCGCA ACTCGATTGC GTGTTGACGC CTTCCATTCC GCGTGCGGTC ACGCTGGCGG AACTCGAGCG CGATCCTGTC GGTGCGAACT CGTTGCTCGG GCATTACACG AACTTCATGA ACCTGCTCGA CTACACGGCT GTCGCGACGC CCGCGGGTTT CATGCGTAAC GGCCTGCCGT GGGGCGTGAC ACTGTTCGGC CGTGCGTTCA CCGATCAATA TCTGTTGAGC GTCGCCGATG CGCTGCATCG CGAGCTCGCC GTGCCGCTGA TCGGCGGCGC GCAACAGCGC AGCGATGTAC CCGCGCGTGC TGCGCGTCAC GACAGGATGA AGCTGGTCGT GTGCGGTGCG CATCTCGAAG GGCTCGCGCT GAACGGGCAG TTGCGCTCGC GTGGCGCGCG GCTCGTCGAA GCGACGGCCA GCGCACCATG CTATCGGCTG TATGCGCTCT CGGGTGGCAT CATGCAGCGT CCGGGCATGA TCCGCGACAC GGCCAACGGT GCGGCAATTG CCGTCGAAGT ATGGGAATTG CCGAGCAGCG AAGCCGGCTC GTTCCTCGCT GGCATCCCCG CGCCGCTCGC CCTCGGCAAG GTGGAACTTG CGGACGGCCG TTGGGAGACC GGCTTCGTGT GTGAAGCGCA TGGAGTCGAA GGGGCCGTCG ACATCACGTC GTACGGGGGC TGGCGCGCGT GGCTGCAACG CGACGCATCT CCGCAAACCG CCAAGCCTGC CGTCGCGTAA
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Protein sequence | MDSFDLRLPA VRAAYREGRT TPRALLSALR ERAAALNPDF HLFIHLLSDA EIEPYLAALD ERDIDSLPLY GVPFALKDNI DLAGIPTTAA CPAFAYTPDQ SATLVAQLIA LGAVPIGKTN LDQFATGLNG TRSPYGKCRN SVHAGYPSGG SSAGSSLAVA LGVASFALGT DTAGSGRVPA ALNNLVGTKG TKGLLSTAGV VPACRTLDCV TYFTATASEA SELLALTARH DPADAYSRAN PQWNDASAFG AIKGFRFGVP AQLEFAGCDE SPALFAQARA ALETIGGEAV EIDFAPFLEA ARLLYEGPWV AERYSVAGAL MESQPDAVLP VIRDVLAKAP GATAVDAFRA QYRLQALKQY CDAVLAQLDC VLTPSIPRAV TLAELERDPV GANSLLGHYT NFMNLLDYTA VATPAGFMRN GLPWGVTLFG RAFTDQYLLS VADALHRELA VPLIGGAQQR SDVPARAARH DRMKLVVCGA HLEGLALNGQ LRSRGARLVE ATASAPCYRL YALSGGIMQR PGMIRDTANG AAIAVEVWEL PSSEAGSFLA GIPAPLALGK VELADGRWET GFVCEAHGVE GAVDITSYGG WRAWLQRDAS PQTAKPAVA
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