Gene Bphy_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3978 
Symbol 
ID6245508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp952327 
End bp952971 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID642595740 
Producthypothetical protein 
Protein accessionYP_001860147 
Protein GI186472805 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT CCACACTCAC AGCCAGCACG CTCGATCCCG CCAACGCGAT CTTCCGCGAA 
ACCTTGCCCG CGGGCGAGCC GTGGCTCAAG GAACTGAAAG CGGGCCAAAC ACTGCGCATC
CGCGACGTCG AAGGCAATCA GGCGATCGAT ACGCTCTTCT ACAGCCTCGC CGACCCGCGC
GAACGCTACG ACGCGCAACG CACGCTGCGC CGCCAGCAGA GCCTCTATCT GACGACAGGC
ACCGTGCTCT ATTCGAACCT CGGCAATCCG ATGCTGACCA TCGTCGCCGA TACGTGCGGG
CGTCACGACA CGCTCGGCGG CGCATGCGCG CAGGAGAGCA ACACTGTGCG CTACGCGCTG
GAAAAACGAT ACATGCACAG CTGCCGTGAC AATTACCTGC GAGCCTGTGC GCACGACGGC
CGGCTGTCGA AGCAGGACAT CGCCGCCAAC ATCAACTTCT TCATGAACGT GCCCGTCACA
TCCGAGGGCG GCCTCACATT CGAGGACGGC ATTTCGGCGC CGGGCAAGTA TGTCGAGTTG
CGAGCGGAAA TGGATGTGAT CGTGCTGATC TCGAACTGTC CGCAGTTGAA CAATCCGTGC
AACGCATACA ACCCCACGCC TGCCGAACTG ACGATATGGA ACTGA
 
Protein sequence
MTTSTLTAST LDPANAIFRE TLPAGEPWLK ELKAGQTLRI RDVEGNQAID TLFYSLADPR 
ERYDAQRTLR RQQSLYLTTG TVLYSNLGNP MLTIVADTCG RHDTLGGACA QESNTVRYAL
EKRYMHSCRD NYLRACAHDG RLSKQDIAAN INFFMNVPVT SEGGLTFEDG ISAPGKYVEL
RAEMDVIVLI SNCPQLNNPC NAYNPTPAEL TIWN