Gene Bphy_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3976 
Symbol 
ID6245506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp950794 
End bp951567 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID642595738 
ProductABC transporter related 
Protein accessionYP_001860145 
Protein GI186472803 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCCGCAACCT ATGGAAGCAG TATGACGATC AGGTCGTGCT GGAGCGGCTC 
AATCTGCGGA TCGCGGAGGG CGAATTCTGC TCGATGGTCG GCGCGTCGGG CTGCGGCAAG
TCGACGTTCC TGCGGCTGCT GCTCGGCCAG GAGCGTCCGA CGCGCGGCGA GATTCTGCTC
GACGGCGAGC CGCTGCCGCC GGAACCGGAC CCGCATCGCG GCGTCGTGTT TCAGCGCTAC
TCGGTGTTTG CGCATCTGAC AGTGTTGCGC AACGTGATGC TCGGGCTGGA ACTCCCGCAT
GCGCGCTTCA CGGGCCGCCT GTTCGGCGCG CGCCGCCGGC TCGCACGCGA TGAAGCCGTT
GCGATGCTTG CGCGCGTCGG CCTCGCCGAT TCGCTCGACA AGTATCCGCA CCAGCTGTCG
GGCGGCATGC AGCAACGTCT CGCGCTCGCT CAGGCACTCG TGATGAAGCC GCGCGTGCTG
CTGCTCGACG AGCCGTTCGG CGCGCTCGAT CCCGGCATCC GGCGCGACAT GCACGACTTG
CTGACGGGCC TCTGGCGCGA AGCGAAGCTG ACCGTCTTCA TGGTCACGCA CGATCTTAAA
GAGGGGTTCA CGCTCGGCAG CCGCGTGCTC GTATTCGACA AGGTGCGCAT CGATCCGCAA
GCGCCGCAGG CGTATGGCGC GCGCATCACC TACGACATTC CGCTCGAACG CAACGGCATG
CGCGAGCCGC AGGCGCCGAC GGCAATTCCG CCGCTGCTTG CCGTGCCCGC ATGA
 
Protein sequence
MIEIRNLWKQ YDDQVVLERL NLRIAEGEFC SMVGASGCGK STFLRLLLGQ ERPTRGEILL 
DGEPLPPEPD PHRGVVFQRY SVFAHLTVLR NVMLGLELPH ARFTGRLFGA RRRLARDEAV
AMLARVGLAD SLDKYPHQLS GGMQQRLALA QALVMKPRVL LLDEPFGALD PGIRRDMHDL
LTGLWREAKL TVFMVTHDLK EGFTLGSRVL VFDKVRIDPQ APQAYGARIT YDIPLERNGM
REPQAPTAIP PLLAVPA