| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3959 |
|---|
| Symbol | |
|---|
| ID | 6245489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 933883 |
|---|
| End bp | 934893 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642595721 |
|---|
| Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_001860128 |
|---|
| Protein GI | 186472786 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCA TCCGCCAGAT CGCCGCCGTA TCCGGACTCG CCCTCGCAGC CGCTTCCGCC
ACCGCTCATG CAGAAAAAAT CTCGATCATG GTAGGCGGTG CCGCCAAGAT CATCTATCTC
CCCGCGAAGC TGACGGAGCA GCTCGGCTAC TTCAAGGACG AGGGCCTCGA CGTCGAGATC
CTTTCTCAAC CTGCCGGCGT CGACGCCGAA AACGAGCTGC TCGCGGGCGC GGTGCAAGGG
GTGGTCGGCT TCTACGATCA CACGATCGAC CTGCAGAGCA AGGGCAAGGA AGTGCAGGCG
CTCGTGATCT TCGGCCAGGT GCCGGGCGAA GTCGAAATGG TGTCGACAAA GGCATCGGCG
ACACTCAAGA GCATGGCCGA CGTGAAGGGC AAGACACTCG GCGTGACGGG CCTCGGCTCA
TCGACGAGCT TCCTCACGCA GTATCTCGCG CAACGCGCGG GCATCCCGTC GACGCAATAC
ACGCTGCTGC CCGTCGGCGC TGACAACAGC TTCATCGCCG CGATCAAGCA GGAGCGCATT
GACGCCGGCA TGACCACCGA GCCGACCGTC TCGCAGCTGC TGAAGATGGG TGACGCGAAG
GTGCTCGTCG ATATGCGCAC GCTCGAAGGC ACGCGCGCCG CGCTGGGCGG CACGTATCCC
GCCTCGAGTT TCTACGTGCA GCGTGCGTGG GCCGAATCGC ACAAGGCCGA CGCCACCAGG
CTCTCGCATG CATTCGCGAA GACGCTGAAT TTCATCGCGA CGCATAGCGC GGAAGACATC
GCCGCAAAGA TGCCGAAGGA CTATTACGGC AGCAACAAGG ATCTGTACGT CGCCGCGCTA
AAGGCTTCGC TGCCTATGTT CACGAAAGAC GGCAAGATGC CCGCCGACGG TCCCGAGACC
GTGCTGAAAG TGCTCGCGTC GTTCAATCCG TCCGTGAAGG GCAAGCATAT CGACCTCGCG
AAGACCTACT CGAACGAATA CGTGTCGACC GTCTCCACGG CATCGAAGTA A
|
|---|
| Protein sequence | MRTIRQIAAV SGLALAAASA TAHAEKISIM VGGAAKIIYL PAKLTEQLGY FKDEGLDVEI
LSQPAGVDAE NELLAGAVQG VVGFYDHTID LQSKGKEVQA LVIFGQVPGE VEMVSTKASA
TLKSMADVKG KTLGVTGLGS STSFLTQYLA QRAGIPSTQY TLLPVGADNS FIAAIKQERI
DAGMTTEPTV SQLLKMGDAK VLVDMRTLEG TRAALGGTYP ASSFYVQRAW AESHKADATR
LSHAFAKTLN FIATHSAEDI AAKMPKDYYG SNKDLYVAAL KASLPMFTKD GKMPADGPET
VLKVLASFNP SVKGKHIDLA KTYSNEYVST VSTASK
|
|---|
| |