| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3956 |
|---|
| Symbol | |
|---|
| ID | 6245486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 929841 |
|---|
| End bp | 931433 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642595718 |
|---|
| Product | YidE/YbjL duplication |
|---|
| Protein accession | YP_001860125 |
|---|
| Protein GI | 186472783 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2985] Predicted permease |
|---|
| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAG TCCGGACGTT GCTTGAATCG CAGCCGTTGC TCACATTGTT TCTCACCGTG
GCGGTGGGTT ATGTGATCGG TGAATGCAGC ATCAAAGGCG TGGCGCTCGG ATCGGGTGCG
GTGCTGTTCG TCGGACTCGC GATCGGCGGC TTTGCGCCCA GGTCCGCGCC ACCCGCATTG
CTCGGCACGC TCGGGCTGCT GTTGTTTCTC TATGGCATCG GCGTGCAATA CGGCGCGCAG
TTCTTTGCCG GCCTGTCGAG CACGGATGGA CTCAAGGCGA ATGCCGCCGC CGTGCTCGGC
GTACTCGGCT CGGGTTTCGT TTCGCTTGCG CTCGGGCCGC TGTTCGGCGT GAAGCTCGAT
CAGGCGCTGG GCCTCTTTGC CGGTGCAGGC ACGAGCACGG CGAGTCTTCA GGCGGTGCTA
GCGGTGCTGA AAGGCGAGGG TGCCGCTGTC GGATATAGCG TCGCGTATCC GTTCGGCGTC
GCCGGGCCGA TCCTGTTTCT CTATCTGCTG AGCGTTGCGC TCGCGCGCAG GATCGACACG
CCGCCCGCGC ATCTCATCGA AACCGCCGAG ATCGCGCTGC GCAACCAGGC GTTTGTCGGG
CTCACGTTTC CCGAACTGAA GGCGCGTCTG CCCGCTAGCC TCGGCATCGT GGCCGTGCGC
CGCGCGCATC ACAACCAGTT GCCCGACGAC GATCTCGTCA TGCAGACCGA CGACGTGCTG
CTCGCGACGG CAATGGACCG CGACGAATTG CGCAAGGCTG CCGAGCTGCT CGGCGAATTG
CAACCAGGAC GCATGATGCG GTCTCGCGAA GATCTCGACT ATCTGCGCGT GTTCGCGTCG
AGCCGTGTGG TGGTCGGTCG TCCGCTGGGC GATATCCGCT TTCCCGACGG CATGGTGTGC
ACGATCGCGC ATGTGCGTCG CGGCGACGCC GACATGCTGC CGACCCCCGG TCTGATACTC
GAGTTCGGCG ACCGTGTCGG CCTGCTGATC GGCTCGGGTC AACGCGACGC CGTGCGCAGG
CTGTTCGGCG ATTCGATCAA GGGCACGGCC GAACTCAGCT ATATCTCGAT CGGTGTCGGC
GCCGCGCTTG GCTTGCTGGC CGGTCTGATT CCGCTGCCCA TACCCGGCGT CGGCAAGCTC
TCGCTCGGTC TGGCGGCGCT GCTGCTGGTC GCGCTCTATC TAGGCAAGAT GCGGCGTCTG
GGAAGCCTCG TCTGGACGAT GCCGCTATCC GCGAACCTGG TGTTGCGCAA CTTCGGCTTG
ACGGTTTTCC TCGCGCAAGT CGGGCTGTCT TCGGGCCCGA AGTTCTTCGC GACGATCGGG
CTGACGGGCG CCGCGTTCCT GCTGTACGGT GCGGCAATTC TGATCGCACT CGTGTGCATC
ACGGCCGCGT GCTGCCTGTG GATTTTCCGC TTGCCGTTCG ATGCTACGGT CGGCGTGATC
AGCGGCGCGA CGGGCAACCC CGCGATCCTC GCATTCGCGA ACCGCATCGC GCCCACCGAT
CGGCCCGACG TCGGCTACGC GATGATCTTT CCGTCGATGA CGATCGTGAA GATCCTGTTC
GTCGAGATCG CCGCCGTGAT CGTCGGCAGA TAG
|
|---|
| Protein sequence | MDAVRTLLES QPLLTLFLTV AVGYVIGECS IKGVALGSGA VLFVGLAIGG FAPRSAPPAL
LGTLGLLLFL YGIGVQYGAQ FFAGLSSTDG LKANAAAVLG VLGSGFVSLA LGPLFGVKLD
QALGLFAGAG TSTASLQAVL AVLKGEGAAV GYSVAYPFGV AGPILFLYLL SVALARRIDT
PPAHLIETAE IALRNQAFVG LTFPELKARL PASLGIVAVR RAHHNQLPDD DLVMQTDDVL
LATAMDRDEL RKAAELLGEL QPGRMMRSRE DLDYLRVFAS SRVVVGRPLG DIRFPDGMVC
TIAHVRRGDA DMLPTPGLIL EFGDRVGLLI GSGQRDAVRR LFGDSIKGTA ELSYISIGVG
AALGLLAGLI PLPIPGVGKL SLGLAALLLV ALYLGKMRRL GSLVWTMPLS ANLVLRNFGL
TVFLAQVGLS SGPKFFATIG LTGAAFLLYG AAILIALVCI TAACCLWIFR LPFDATVGVI
SGATGNPAIL AFANRIAPTD RPDVGYAMIF PSMTIVKILF VEIAAVIVGR
|
|---|
| |