| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3955 |
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| Symbol | |
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| ID | 6245485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 927637 |
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| End bp | 929574 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642595717 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001860124 |
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| Protein GI | 186472782 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.719162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCC CGCAGGACCC TGCATCGTTT CGCACCCATC CGGCCGAACA GGCCGCGCTT
TCGCGCTCGC AGTTCGACGC GTTTTCGCGG CAATTGCCGC TGCTGTATGT GATCCTCGTG
ATCAACAGCC TCGCGGTGGC CGTGACGCAC GCCGCCATCG CGCCAGCGTG GCTCTCGATC
TGGCTGCCCG CGGCCATGTG CACGGCATGC GCGATCCGGC TCGTCGTCTG GGTGCGGCGC
AGGCAGCGCC TCGCGTCGCT GACGGACGAA GAGGTCGCGG CGCGGCTGAA GACGACCGTC
CGGCTGATCG CGCTGCTAGG CGCCGCCTTC ACGGGTTGGG GGCTGATGCT GTTTCCGTAT
GGCGACCCAT ACGCTCGCGC GCACGTTGCT TTTTACATGT CGATTACGGT GATCGGCTGC
ATCTTCTGCC TGATGCACAT GCGCAAGGCT GCGCTGCTGC TGACGGCCAT CGTAATCGTG
CCGTTCTCGC TGTTCTTTTC GCTGACGCAT AACGCGGTGC TTGTCGCGAT TGCGATTAAC
ATGCTGCTCG TCGCCGTCGC GATGATCCTG GTTTTGCTCA CCTACTATCG CGACTTTGCG
AATCTCGTCG CATCGAAGCA CGCATTGCAG GCGAAGCAGG CCGAACTGCA ACGGCTAAGC
GACGAAAACT CGCGTCTTGC CAATCTCGAC AACCTGACGG GCCTGCCGAA CCGGCGGCGT
TTCCTTGCCG ACCTCGATGC GCTGTTTCAA ACGGCGCAGG CGCAGCACGC GCGCTTTGCC
GTCGGCGTGA TCGATCTCGA CGGCTTCAAG CAGGTCAACG ATCTGTACGG TCATGGTGCG
GGCGACCGCG TGCTCGAAGA AGTCGGCCGG CGGCTGCTGG ACAGGTCAGG GCCGCGCATC
CGGCTCGCGC GTCTGGGCGG CGACGAGTTC GGCCTGCTGG TGACGGACGT GCGCGAGCCG
CAGGACCTGC GCGACATCGG CGCGGCGATC TGCGAGACGC TGCGTGCGCC GTATGCATGG
CCCGGCGCGA CCGCGCGGCT GTCGGGATCC CTTGGTTTCG CCATTTATCC GGATGCAGGT
GTCTCGCCTG CGCAGTTGTT CGAGCGCGCG GACTATGCGC TGTACTTCGC GAAGGAGCAC
CGCCGCGGCG GCACGACGAT TTTCTCGGCG GAGCACGAGA AGCAGATCCG CGAGCTTGGA
CAGGTCGAAC AGGCGCTGCG GCAGGCGGAC CTGGAGCACG AAATGACGCT GCATTTCCAG
CCGATCGTCG ATGTGGTCCG CGATCGGGTC GTGTCATACG AAGCGCTCGC GCGATGGAAC
AGTCCCACGC TTGGTTCCGT TGCGCCGTCG CTGTTCATCA AGGTGGCCGA ACGCAGCGAT
TTCATTCATG CCGTGACGGT TGCGTTGTTG CGCAAGGTGC TCGCGACGAT GCACCAGAGC
GACCCCGCCG TGCGCGTCGC CTTTAATCTG TCGGCGCGCG ACATCGGTTC GGCTGAGGCG
GTGGCGAATA TCACGGACGT CATCCGCGAG AGCGGCATCG AGCCTTCGCG ATTGACGTTC
GAAGTGACGG AGACGGCCGT CATCCAGGAT TTCGAGCAGG CGTCCGCTTC GCTCCACGCT
TTCAAACGGC TCGGCGTGCA TATTTCACTC GACGATTTCG GCACCGGCTA TTCGAGCCTC
ACGTGCATTC ACAGACTGCC GCTCGACAAG ATCAAGATAG ACCGAGGCTT TCTCGATCGC
ATCGACGCGG ATGGGGCGGC GCAGGACATC GTGCGCAGCA TCGTGGAGTT GTGCCGATCG
CTCGAATTGA TCTGCGTGGC GGAAGGCGTA CAGACGCAAG CGCAGGCGAA AGTGCTGCGC
GGACTCGGCT GCACGGCGAT GCAAGGCTTT TACTTCGGCA TGCCGATGCC CTTCGACGAG
CAGGCCCTGG TGGCGTGA
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| Protein sequence | MIRPQDPASF RTHPAEQAAL SRSQFDAFSR QLPLLYVILV INSLAVAVTH AAIAPAWLSI
WLPAAMCTAC AIRLVVWVRR RQRLASLTDE EVAARLKTTV RLIALLGAAF TGWGLMLFPY
GDPYARAHVA FYMSITVIGC IFCLMHMRKA ALLLTAIVIV PFSLFFSLTH NAVLVAIAIN
MLLVAVAMIL VLLTYYRDFA NLVASKHALQ AKQAELQRLS DENSRLANLD NLTGLPNRRR
FLADLDALFQ TAQAQHARFA VGVIDLDGFK QVNDLYGHGA GDRVLEEVGR RLLDRSGPRI
RLARLGGDEF GLLVTDVREP QDLRDIGAAI CETLRAPYAW PGATARLSGS LGFAIYPDAG
VSPAQLFERA DYALYFAKEH RRGGTTIFSA EHEKQIRELG QVEQALRQAD LEHEMTLHFQ
PIVDVVRDRV VSYEALARWN SPTLGSVAPS LFIKVAERSD FIHAVTVALL RKVLATMHQS
DPAVRVAFNL SARDIGSAEA VANITDVIRE SGIEPSRLTF EVTETAVIQD FEQASASLHA
FKRLGVHISL DDFGTGYSSL TCIHRLPLDK IKIDRGFLDR IDADGAAQDI VRSIVELCRS
LELICVAEGV QTQAQAKVLR GLGCTAMQGF YFGMPMPFDE QALVA
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