| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3953 |
|---|
| Symbol | |
|---|
| ID | 6245483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 925816 |
|---|
| End bp | 926886 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642595715 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase dimerisation region |
|---|
| Protein accession | YP_001860122 |
|---|
| Protein GI | 186472780 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.731419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGAC TGACGACGAA TTTCGCTGGA ACGCTTTTCG GGCTTCATGG CGAACCCGCG
CACGAACGCA TTGTCGTGGC CAGCGATGCG GACTCGGGCC TGCAAGCCGT GGTCGCCGTA
TACAGCACGG TGCGCGGCCC AGCGTTTGGC GGCTGCCGCT ACTGGCAGTA CGCATCGGAT
TACGAGGCGT ATCACGACGC GCTGCGCCTG TCGCAAGGAA TGGCGTTCAA GAACGCGCTC
GCCGGCCTGC CGTTCGGCGG CGGCAAGGCG GTGATCCTCA AGCGTCCGGA GCAGATGGAT
CGCGCGGCGC TGTTCAAGGC GTTCGGCCGC CTCGTGGAGT CGCTCGGCGG CATGTATCTG
ACGGCCGAAG ACGTTGGCAC GACCGCCGAC GACATGCGCG CGGTGCAGAG CGAAACGGCA
TACGTGAGCG GCATTCCGCG TGAGAACGAC GTGTACGGCG GTAACCCGTC GCCGCGCACT
GCGTATGGCG TGTTCGTCGG CCTGAAGGCG GCGGTGCAGG TCGCGCTCGG CCGCGATACG
CTCGACGGCA TTTCCGTCGC TGTGCAAGGC TTGGGTTCGG TGGGCTGGGA TCTGTGCGAA
AGACTGCATC GCGCGGGCGC CGAACTGATC GTGTCGGATA TCGACGCGGC CAAAACGGAG
CGTGCGCAAC AGATGTTCGG CGCGCGCGTC GCGGATATCG CGCGCATTGC TTCCGTGAAT
GCCGACGTGT TCGCGCCATG CGCGCTCGGC GGCTCGATCA CGGATGCCGT CGCGCACTGC
CAGTTCAAGG TGATAGCGGG TGCAGCGAAC AATCAGCTGA TGTCGCTGGC AGAGGGCGAT
ACGCTGCATC GGCGCGGCAT CTTCTACGCG CCGGACTTTC TCGTGAACGC GGGCGGGATC
ATCAGCTGCG CGCGCGAATA CCTCGGATCG GCCGACAAGC AGGCGGTGCT GGACGAAGTC
GCGCAGATCG GACCGCGCGT ATTCGAACTC GCCGGGCGAG TGAAGGTGTC GGGTATCGCG
CCGGCGCGTG CCGCTGTTGT CTGGGCGCGG GAGATGATGC AGCGCGTCTG A
|
|---|
| Protein sequence | MDRLTTNFAG TLFGLHGEPA HERIVVASDA DSGLQAVVAV YSTVRGPAFG GCRYWQYASD
YEAYHDALRL SQGMAFKNAL AGLPFGGGKA VILKRPEQMD RAALFKAFGR LVESLGGMYL
TAEDVGTTAD DMRAVQSETA YVSGIPREND VYGGNPSPRT AYGVFVGLKA AVQVALGRDT
LDGISVAVQG LGSVGWDLCE RLHRAGAELI VSDIDAAKTE RAQQMFGARV ADIARIASVN
ADVFAPCALG GSITDAVAHC QFKVIAGAAN NQLMSLAEGD TLHRRGIFYA PDFLVNAGGI
ISCAREYLGS ADKQAVLDEV AQIGPRVFEL AGRVKVSGIA PARAAVVWAR EMMQRV
|
|---|
| |