Gene Bphy_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3944 
SymbolrpsU 
ID6245474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp916447 
End bp916659 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content54% 
IMG OID642595706 
Product30S ribosomal protein S21 
Protein accessionYP_001860113 
Protein GI186472771 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0828] Ribosomal protein S21 
TIGRFAM ID[TIGR00030] ribosomal protein S21 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA TCCGCGTAAA AGAAAATGAG CCTTTTGAAG TCGCGATGCG CCGCTTCAAG 
CGCACGATTG AAAAGAACGG TCTGCTGACC GAATTGCGTG CCCGCGAGTT TTACGAGAAG
CCGACGTCCG AGCGAAAACG AAAGAAGGCA GCGGCGGTGA AGCGCCATTT CAAGCGCCTG
CGCAGTCAGC AACTGCCCAA GAAGTTTTAC TGA
 
Protein sequence
MTTIRVKENE PFEVAMRRFK RTIEKNGLLT ELRAREFYEK PTSERKRKKA AAVKRHFKRL 
RSQQLPKKFY