| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3935 |
|---|
| Symbol | |
|---|
| ID | 6245468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 904546 |
|---|
| End bp | 905559 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595700 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001860107 |
|---|
| Protein GI | 186472765 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGC CCAGCGCAAC CGTCCCGATC TCGCTCGTCA ACGGCTTCCT TGCCGCCGCC
GGTGCGCAGC CCGACGTTAC GCAGCGCTAT CTGGAGCGGG CGGGGATAAC GCCTCAACTG
CTTCGTGCAT CGGGCGCGCG CGTGACGGAG GAGCAGTTCT CCACGCTCTA TCGCACGCTG
GCCATCGAAC TCGACGACGA AATGCCGGGC ATTTTCAGCC GGCCGCTTCG CAGCGGCACG
CTGAAATTCC TCTCTCTCAG CTTGCTGGAC GCACGCAATC TGGAGACGGC GCTGCATCGC
TTCGGTCAGT TTATTCACCT CGTGCTCGAC GATTTTCGTT TCGAGTCGCG TCGGGACGAA
TTGATGGCGC AGGTCGAGTT GCTTCCGAAT CCCGCATTTG GAAGCATCAG GCCGCTCGGC
CAGGAGTTAA TGCTCAAGCT CGCGCATGGC GTCTCTTCCT GGCTGATCGG CCAGAGGATC
CCGCTGTTGC AGGTCGATTT CGCGTTCCCG CAACCGCCGC ACGCATTCGA CCACCGCTAT
TTCTTCTCCG GGCCGGTGCG TTTCGGCTGC GACGCCACGC TGATGCGGTT CAGCGCCGCG
TTTCTGGACA TGCCGATCCG CCAGAGCAAG CGCAACCTGC ACAAGTTTCT CGCCCGTTCG
CCGGGCGAGT GGATCTTCGA GTCGTTCAGC GAACAGCGTG TCAGCCATCG TGTCCGGCAA
TACCTCGCTA GCGAGTTGCC CGATCTGCCG ACCATCGACG AAGCCGCAAA GAGCCTGCAC
TGCTCGGTGC GTACGCTGTG CAGGCGACTG TCGTCGGAAG AAACAACATT TCAGCTGCTC
AAGGACGAAT TGCGACGCGA CGTCGCGATC CAGCGTCTGA CGGACACGCA GGACGCGATC
GCCATCATCG CCGGCGACAT CGGATTCGAC GATCCGAGCG CGTTCCATCG GGCGTTCCGC
CACTGGACGG GCAGCACGCC GGGAACCTAT CGGCGGCCCG TTCAGGCGGG GTAA
|
|---|
| Protein sequence | MQAPSATVPI SLVNGFLAAA GAQPDVTQRY LERAGITPQL LRASGARVTE EQFSTLYRTL
AIELDDEMPG IFSRPLRSGT LKFLSLSLLD ARNLETALHR FGQFIHLVLD DFRFESRRDE
LMAQVELLPN PAFGSIRPLG QELMLKLAHG VSSWLIGQRI PLLQVDFAFP QPPHAFDHRY
FFSGPVRFGC DATLMRFSAA FLDMPIRQSK RNLHKFLARS PGEWIFESFS EQRVSHRVRQ
YLASELPDLP TIDEAAKSLH CSVRTLCRRL SSEETTFQLL KDELRRDVAI QRLTDTQDAI
AIIAGDIGFD DPSAFHRAFR HWTGSTPGTY RRPVQAG
|
|---|
| |