| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3913 |
|---|
| Symbol | |
|---|
| ID | 6245447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 884482 |
|---|
| End bp | 885396 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642595679 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001860086 |
|---|
| Protein GI | 186472744 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCT TCGAGGCAAT GGAGATCTTC ACTCGCGTGG TGGACGCGAA CAGCTTTTCA
AAAGTATCTG AAATGCTCGA TTTGCCGCGC GCAAAGGTGA GCAGGACGAT TCAGGCGCTG
GAGGAGCATG TCGGCGTGCG CCTTCTGAAC CGTTCGACGC GCCAGGTCAG CGTCACAGAA
GACGGCGCGC TGTTTTACGA ACGATGCGTG CGCATCCTCG CTGAAGTGGC GGATGCCGAG
TCGTCGCTGT CGAACAAGCG CGAGACTCCG GCGGGCACGA TTCGCGTCGA TACGTCGGGC
ACGCTTGCAC GTGCATTGCT GCTGCCCGTG CTCGACGACT TTTATCAACG CTTTCCCGAG
ATCGACGTGC GCCTCGGCCT CGCGGATCGC AACATCGACC TGATCCAGGA CGGCGTGGAC
TGCGTGATCC GCATGGGCAT GCTCGAAGAG TCGAGTCTCG TGGCAAAGCG CATCGGCAGT
TCGCGCATCG TCACATGCGC GTCGCCTGCC TATCTGGACA AACACGGCAC GCCCAGGACG
CTCGAAGAAC TCGCGGAGCA CCAGGCTGTG AACTACGTAT CGGCGCGCAC GGGGAGAACC
TTTCCGTTCG AGTACAACGT CGGCGATGAA GTGGTGAAGG TGCAGATGAA GAGCGTGCTC
GCCGTCAACG ACGGTTCGGT GTATATCAAT GCGGGCGCGC TCGGTCACGG CATCATCCAG
CCGTCGCGCT TCATGGTGGC CGAGTTGATC AACCAGGGCG CGCTGCGCGA AATCCTCACC
GAGTACGACA GCCCGTCGAC GCCGCTTTCG ATCGTTTATC CGCATCGCCG CAATCTCAGT
TCGCGCCTGC GCGCGTTCGT CGACTGGGTG TCGGAGATTG CGCACAACAA TCCCGACCTG
CGCATCAAGG ACTGA
|
|---|
| Protein sequence | MDRFEAMEIF TRVVDANSFS KVSEMLDLPR AKVSRTIQAL EEHVGVRLLN RSTRQVSVTE
DGALFYERCV RILAEVADAE SSLSNKRETP AGTIRVDTSG TLARALLLPV LDDFYQRFPE
IDVRLGLADR NIDLIQDGVD CVIRMGMLEE SSLVAKRIGS SRIVTCASPA YLDKHGTPRT
LEELAEHQAV NYVSARTGRT FPFEYNVGDE VVKVQMKSVL AVNDGSVYIN AGALGHGIIQ
PSRFMVAELI NQGALREILT EYDSPSTPLS IVYPHRRNLS SRLRAFVDWV SEIAHNNPDL
RIKD
|
|---|
| |