| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3905 |
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| Symbol | |
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| ID | 6245440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 877554 |
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| End bp | 878795 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642595672 |
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| Product | porin |
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| Protein accession | YP_001860079 |
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| Protein GI | 186472737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGCA CTTCGCTTGC GGCGCAAACG CCCTTTCCGC CCCCCGTCGC GCACCACAAC
AACAAGCTCA TGCAGTGTGT TCTCAACCAT GAAAAGACAA CACCCATGAC CCAGCAATTC
AAACGGACAG TGGCCGCATT CGGCGCGACG GCATGCGCGC TTGCGTGCCA GACGGCATTC
GCACAAAGCT CGGTGACGCT GTACGGCGTG GCGGACGTAG GCATTCGCTA CCTCACGCAT
TCGAATGCGA ACAACGACGG CCGCCTGTTC GTGACCAACG GTGCGATCAC GAACAGCCGT
TTCGGCATCA AAGGAACGGA AGACCTCGGC AATGGGCTGA AGGCGATCTT CCAGCTTGAA
AGCGGCATTG ACCTGCAAAG CGGTGCGCAA TCGGATAGCC AGCGCCTCTT CAATCGCGCG
GCGTTCGTCG GTCTGTCGAG CAACTACGGA ACCGTCACGC TGGGCCGCCA GAAGACACCG
CTATTCGATC TGCTCGGCGA CACATACGAT CCTCTGACCG TCGGCAACTA CTTCGAAAAC
GCATGGCTGC CCGTCGCGCT CGGGGCGGGC CTCTATGCGG ACAATGCCGT GAAATACGAC
GGCACGTTCG GCGGCCTGAA CGTGAAGGCG ATGTACTCGT TCGGCACAAA CTCGACGTCG
ACGGGCGCGA ACGGCTTCTC CGGCCAGATT CCGGGTCACC TTGGCGCAGG CAACATGTAT
GGCTTCACGG CGTCCTACTC GTTCGGCGCA TTGAGCATCG CCGCCGGCGT GCAGCAGAAC
AGCGACAACT CGAACAACAA GCAGACCATC TACAACGCCA ACGCGGTCTA CGCGTTCAGC
ACGGCAAAGA TCTACGTCGG CTATCTGCAC TCGAAGGACG ACACGGGCTT CGTCGACAGC
ACGCTCGCGC AGCGCGATCT GACGCTCGGC GTCGACATCC TGAAGGGCTC GGGCCGCAAG
GACGACGGTC CGTTCGCAGG CGTGACGTGG CAGGCAACGC CCGCGCTGCT GTTGACGGGC
GCGTTCTACT ACGACCACAT GAAGAACGCT GCGATCGGCG GCGGTGCGGT CGGCAGCGGC
AACCGCTATA CGGGCGTGGC CGTAGCGGAA TATGCACTGT CGAAGCGCAC TGAGGTATAT
GGCACCGTTG ACTTCAACAA GGTCACGGGC GCGGCGACGG TCGAACTGCC GGGCTCGTCG
AACCAGACGG GCGTATCGGT CGGTATCCGC AACATCTTCT GA
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| Protein sequence | MDCTSLAAQT PFPPPVAHHN NKLMQCVLNH EKTTPMTQQF KRTVAAFGAT ACALACQTAF
AQSSVTLYGV ADVGIRYLTH SNANNDGRLF VTNGAITNSR FGIKGTEDLG NGLKAIFQLE
SGIDLQSGAQ SDSQRLFNRA AFVGLSSNYG TVTLGRQKTP LFDLLGDTYD PLTVGNYFEN
AWLPVALGAG LYADNAVKYD GTFGGLNVKA MYSFGTNSTS TGANGFSGQI PGHLGAGNMY
GFTASYSFGA LSIAAGVQQN SDNSNNKQTI YNANAVYAFS TAKIYVGYLH SKDDTGFVDS
TLAQRDLTLG VDILKGSGRK DDGPFAGVTW QATPALLLTG AFYYDHMKNA AIGGGAVGSG
NRYTGVAVAE YALSKRTEVY GTVDFNKVTG AATVELPGSS NQTGVSVGIR NIF
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