Gene Bphy_3903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3903 
Symbol 
ID6245438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp876160 
End bp876885 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID642595670 
Productpirin domain-containing protein 
Protein accessionYP_001860077 
Protein GI186472735 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA TTCGCCACGC CAGCGACCGC GGACGCGCCG AACACGGTTG GCTCAGCTCG 
CGCCACACGT TCTCTTTTGC GAACTACTAC GATCCGAAGC AGATCGGCTT CTCCGACCTG
CTCGTGATTA ACGACGACCG CGTGGCTCCT GGCCGCGGCT TCGGCAAGCA TCCGCACCGC
GACATGGAGA TCTTTTCGTA CGTGCTGGAA GGCGCGCTCG AGCACAAGGA TTCGATGGGC
ACGGGCTCCG TGATCGTCCC CGGCGACGTG CAGTTGATGA GCGCGGGCAC GGGCGTCGCG
CACAGCGAGT TCAATCACTC GGCCAGCGAC CCCGTGCACT TCCTGCAAAT CTGGATCGCA
CCGTCCGTCA AGAACGCGAC GCCGCGTTAC CAGCAGCAGA ACTTTTCGGC GCAAGAGAAG
CGCGGGACGT TGCGGCTCGT GTTATCGCCG GATGGTCAGG ACGGCTCGCT CGAGTTGCGC
CAGGACGCGC GTGTGTACGC CGGTCTTTTC GACGGCGATG AAACGGCAGG CATCGATATC
GCCTCCGACC GCTATGCATA TGTGCATGTG GCCCGCGGCA GCGTGAAGGT GAACGGCGTC
GAACTGAATG AAGGCGACGG TGCGCGCATT CGCGATGAGC GCCGCCTCGA ATTCACCGAA
GGCGACGATG CGGAAGTCAT CGTCTTCGAT CTGCGCAACA ACGAAGTGTC GGAACTGTGG
TCCTGA
 
Protein sequence
MIDIRHASDR GRAEHGWLSS RHTFSFANYY DPKQIGFSDL LVINDDRVAP GRGFGKHPHR 
DMEIFSYVLE GALEHKDSMG TGSVIVPGDV QLMSAGTGVA HSEFNHSASD PVHFLQIWIA
PSVKNATPRY QQQNFSAQEK RGTLRLVLSP DGQDGSLELR QDARVYAGLF DGDETAGIDI
ASDRYAYVHV ARGSVKVNGV ELNEGDGARI RDERRLEFTE GDDAEVIVFD LRNNEVSELW
S