| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3890 |
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| Symbol | |
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| ID | 6245426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 863834 |
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| End bp | 864424 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595658 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_001860065 |
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| Protein GI | 186472723 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAC TTAAGCAAAC CCCTTCGCAA ACGGTCGGAC CGTACTTCGC TTACGGCCTG
TGCCCCCAGC AATACAACTT CGACCTGAAG AGCCTGTTTT CGGGCGTGCT GGCGGATCGT
GAGGCAGCCG GCGAGCACAT CACCGTGCTC GGCCAGGTGT TTGACGGCGA CGGCGCCGTC
ATCGGCGACG CGATGATCGA AGTGCAGCAG GTGGACAGCG AAGGCCGCTA TCCAGCATCG
CGCGAAGAAG TGGCGAAGAC GGGCTTTCGC GGGTTCGCAC GCTTTGGCAC CGGCACGGAT
CCGCAGAAGC GCTTCATCTT CGAAACGGTG AAACCGGGCC GTGCATCGCC CGACGAAGCG
CCGCACCTGA ACGTAATCGT CACGATGCGC GGCATGCTGC TGCATACCTT CACCCGTGTG
TATTTCGACG ACGAAGCCGC TGCGAACGCC AAAGACCCCG TGCTCGCAAG CGTGCCCGCC
GAGCGCCGCG CGACGCTTGT CGCCAGGCGC GAAACGAACG CCGGCAATGC CGTGTATCGC
TTCGACATTC ACATGCAAGG GCCGAACGAA ACGGTGTTCT TCGACCTGTG A
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| Protein sequence | MTALKQTPSQ TVGPYFAYGL CPQQYNFDLK SLFSGVLADR EAAGEHITVL GQVFDGDGAV
IGDAMIEVQQ VDSEGRYPAS REEVAKTGFR GFARFGTGTD PQKRFIFETV KPGRASPDEA
PHLNVIVTMR GMLLHTFTRV YFDDEAAANA KDPVLASVPA ERRATLVARR ETNAGNAVYR
FDIHMQGPNE TVFFDL
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