| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3868 |
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| Symbol | |
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| ID | 6245406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 842397 |
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| End bp | 843056 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642595638 |
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| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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| Protein accession | YP_001860045 |
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| Protein GI | 186472703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.909669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.875858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACT TCTTCGATTT GCAATACGCC GCGCGCATTC TGCCCGATCT GGCACGCGCA
TCTGTGTACA CGATTCTGAT CACGTTGGTC GGCTTTTCGA TTGCACTCGT GCTCGGCCTC
GTGTTCGCGA TTCTCCGGCG CAGTCATATC AAGCCTGTTT CGCGCACGGT CGGATTCGTC
GTCGAGTTTA TCCGCAGCAC GCCGCTGCTG ATTCAGGTGT ACGTGCTGTT CTATGTGCTT
CCCATCTACG GCGTGACGAT GTCAGCACTC ACAGCGGGCA CGATCGGCAT TGCGCTGCAT
TATGCGTGTT ATACGTCGGA GGTCTATCGC GCGGGGCTGA ATGGCGTGGC GCGAGGCCAG
TGGGAAGCAG CGTGCGCGTT GTCGCTGTCG CCGTGGCGCA CGTATAGCGG CGTGATTCTG
CCGCAGGCCG TTCGGCCCGT GATTCCTGCG CTCGGCAATT ACCTCGTCGC GATGTTCAAG
GACACACCTG TTCTTTCGGC CATCACTGTG GTCGAACTGA TGCAGCAGGC GAAGAACGTC
GGTTCGGAAA CGTTCCGCTA CCTCGAGCCG ATCACGCTCG CGGGCCTGTT CTTCCTCGTC
ATCAGCATTA CATTCGCGCA ACTCGTGCGG CGGCTGGAAT TCCGCCTGAG GCTGCCATGA
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| Protein sequence | MNHFFDLQYA ARILPDLARA SVYTILITLV GFSIALVLGL VFAILRRSHI KPVSRTVGFV
VEFIRSTPLL IQVYVLFYVL PIYGVTMSAL TAGTIGIALH YACYTSEVYR AGLNGVARGQ
WEAACALSLS PWRTYSGVIL PQAVRPVIPA LGNYLVAMFK DTPVLSAITV VELMQQAKNV
GSETFRYLEP ITLAGLFFLV ISITFAQLVR RLEFRLRLP
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