| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3867 |
|---|
| Symbol | |
|---|
| ID | 6245405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 841729 |
|---|
| End bp | 842400 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642595637 |
|---|
| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
|---|
| Protein accession | YP_001860044 |
|---|
| Protein GI | 186472702 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03004] ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.752491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAAC TGTTTCCCCT GCTGCTTCAA GGCACCATCG TCACGATCGA GATTGCCGCA
TTTGGCACGC TGCTCGCCAT CGCGATGGCA TTCGTCGCCA CGGCCGCCAA GCTCGCACCC
TGGGCGCCCG TGCGCTGGGT GGGCAACGTG TATGTCGAAG TCTTTCGCGG CACATCGCTG
CTCGTGCAGC TCTTCTGGTT CTTTTTCGTG CTGCCGCTGC CGCCGTTCAG AATCGAACTG
ACGCCGTTCA CGGTGGCTAT CGTCGGGCTG GGTCTGCATT ACGGCGCCTA TGGTTCGGAG
ATCTTGCGCG GCGCACTGCG CTCGGTGCCG GGCGGTCAAT TCGAAGCCGC CGTCGCATTG
AACATGTCGG CTTTCACTCG CATGCGCCGC ATCGTGTTAC CGCAGGCGAT GATCAACGCA
TTGCCGCCCG CGACGAACCT GATGATCGAA CTGTTGAAGG GCACGTCTCT CGTCTCGCTG
ATCACACTGT CGGACCTCAC GTTCCGCGCA CGCCAGCTCG ACGAAGCGAC GTTCAAGACG
GCCGAGATCT TCTGCCTCAC GCTCATCATC TACTTCGTGC TCGCACAGTT GCTCGCCACG
TTGATGCGTC ATTTCGAACG GCGCGTGAGT CACGGCATCA TCGCTCACAC CACGCGAAAG
GCGGCGCCAT GA
|
|---|
| Protein sequence | MRELFPLLLQ GTIVTIEIAA FGTLLAIAMA FVATAAKLAP WAPVRWVGNV YVEVFRGTSL
LVQLFWFFFV LPLPPFRIEL TPFTVAIVGL GLHYGAYGSE ILRGALRSVP GGQFEAAVAL
NMSAFTRMRR IVLPQAMINA LPPATNLMIE LLKGTSLVSL ITLSDLTFRA RQLDEATFKT
AEIFCLTLII YFVLAQLLAT LMRHFERRVS HGIIAHTTRK AAP
|
|---|
| |