| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3860 |
|---|
| Symbol | |
|---|
| ID | 6245398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 834147 |
|---|
| End bp | 834617 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642595630 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001860037 |
|---|
| Protein GI | 186472695 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG ATCGCTACGA TCTTGCCATC CTTCGCATCC TTGCGGGGGA CGGACGCATT
ACGAAGTCGC GTCTCGCCGA GGAAGTGAAT CTCTCTATCT CGCCGGCGTG GGAGCGTGTG
AAGCGGCTTG AAGAGAGTGG TGTGATTCGT GGTTATCGGA CAGACATTGA TTGGACTAAA
GCATTCAAGG GTAGCCGCAT TATCGTCGAA GTGACGCTGG CGAGGCATAC CGCTCAGGAT
ATGCGGCGCT TCGAGGAGCG GGTTTTAGCT GCTGAAGAAG TGACGCAGTG CCATGCCACC
GGCGGGGGCG TTGATTATGT GCTCCATGTG GTGTCTCGTG ATATCGATCA CTATCAGCGG
TTTATCGATG CTTTGCTTAC CGAAGAGATT GGGATTGAGC GTTATTTCAC TTATGTGGTG
ACGAAGGTAG TGAAGGATGG CGGCGAAGGG TTTCCCGAGT GGGAGGCGTG A
|
|---|
| Protein sequence | MKLDRYDLAI LRILAGDGRI TKSRLAEEVN LSISPAWERV KRLEESGVIR GYRTDIDWTK
AFKGSRIIVE VTLARHTAQD MRRFEERVLA AEEVTQCHAT GGGVDYVLHV VSRDIDHYQR
FIDALLTEEI GIERYFTYVV TKVVKDGGEG FPEWEA
|
|---|
| |