| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3859 |
|---|
| Symbol | |
|---|
| ID | 6245397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 832472 |
|---|
| End bp | 833977 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642595629 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001860036 |
|---|
| Protein GI | 186472694 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTAG GTCATCCCGT TCTGTTCAAG TCCCTGTGTT ACATAGACGG CCGCTGGGTC
CACAGCGAGA CAGCGTCCAC GATAGCGGTG CAGAACCCCG CGGACCAGGA GGTGATCGGT
CACGTCCCGA TGCTGGAGCG TCAGCAAATC ACCGAAGCAG TAACGTCAGC ACAAAAAGCA
TTTGAAACAT GGCGCTGGGT GCCGGTAGCA AAACGCGCGG CGTTACTGCT GCGCTGGCAC
GAGCTCGTGT TGCGTCATCG TAACGATCTG GCAGGCATAC TCGCCCTCGA GCAAGGCAAA
CCGCTCGCCG AAGCACAAGG CGAGATCGCT TATGGCGCGA GCTTCATCGA ATGGTTCGCG
CACGAAGGCA AGCGCCTGAA TGGCCGCACC ATTCCGACTC ACATCGACGG CGCCCATCTC
GGCACGATGA TGGAACCCGT CGGTGTCGCT GCATTGATCA CGCCGTGGAA TTTCCCCAAC
GCGATGATCA CGCGCAAGGC GGCGGCCGCG CTGGCAGCCG GTTGCACAGT CGTCGTGAAG
CCTGCGCACG AGACGCCGTT TTCCGCTCTG GCACTTGCTC AACTCGCGGA AGAAGCCGGC
TTCCCGCCCG GCGTATTCAA TGTCGTGCTC GGCGAGCCGC AAATGGCGAT GGAAACGCTG
GTGCGCGATC CGCGTGTACG CACCGTGAGC TTCACGGGTT CGACGCGTGT GGGTGGCCTC
GTCATGCAGG CCGCCGCGCA AAGCGGCATC AAGAAGACGG CGCTCGAACT CGGCGGCAAT
GCGCCGTTCA TCGTGACGGA AGATACCGAT CTCGAACAGG CGGTGCGCGT TGCCGTCGCC
GCAAAGTTTC AGACGTCGGG GCAGGACTGT TGCGCCGCGA ATCGCATTCT CGTTGCACGG
GCCGTATACG ACACGTTCGT CGAACGATAT GCGCAGGCCG TGCGTGCGTT GAAAGTGGGC
GCGGCATTCG AGCCCGGCAG CGAAGTCGGG CCGCTGATGC ATCAGGCCGC ATTCGATTCG
ACACAACAGC GCGTCGAAGA TGCCCGCGCC AAAGGCGCGC GTATTCTCAC GGGCGGCACG
CCGCATGCTC GTGGTGGATG GTTCTTCGAG CCGACCGTGA TCGCCGATGC CGCAAAAGGC
ATGCGCGTCT ACGACGAAGA GAACTTTGCG CCCATCTCAG CCGTGTCGCC GTTCGACACG
CTCCAGGAAG CGATCGCGCG CGCCAACGAC ACGGAGCACG GTCTCGCCGC CTATCTGTGC
GCAAAAGACC TGAACACGGT CTTTCAGGTG ATACGCCAGT TGGACTTCGC GATGGTCTCC
GTGAACGGCG CGAAGTTCAC TGGCGCGCCG ATCCCATTCG GCGGAATGAA GGCATCGGGT
CTCGGCCGCG AAGGCGGGCT TGAAGGCTTC GATGCCTTCG TTGAAACCCG TTATTTCTGT
CTCGGTCAGC TGGGCTTGCC TATCGCCGAC GCTGTCGCTT CCGTTCACCG GCCGCTTGCC
GCGTGA
|
|---|
| Protein sequence | MLLGHPVLFK SLCYIDGRWV HSETASTIAV QNPADQEVIG HVPMLERQQI TEAVTSAQKA
FETWRWVPVA KRAALLLRWH ELVLRHRNDL AGILALEQGK PLAEAQGEIA YGASFIEWFA
HEGKRLNGRT IPTHIDGAHL GTMMEPVGVA ALITPWNFPN AMITRKAAAA LAAGCTVVVK
PAHETPFSAL ALAQLAEEAG FPPGVFNVVL GEPQMAMETL VRDPRVRTVS FTGSTRVGGL
VMQAAAQSGI KKTALELGGN APFIVTEDTD LEQAVRVAVA AKFQTSGQDC CAANRILVAR
AVYDTFVERY AQAVRALKVG AAFEPGSEVG PLMHQAAFDS TQQRVEDARA KGARILTGGT
PHARGGWFFE PTVIADAAKG MRVYDEENFA PISAVSPFDT LQEAIARAND TEHGLAAYLC
AKDLNTVFQV IRQLDFAMVS VNGAKFTGAP IPFGGMKASG LGREGGLEGF DAFVETRYFC
LGQLGLPIAD AVASVHRPLA A
|
|---|
| |