| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3850 |
|---|
| Symbol | |
|---|
| ID | 6245388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 819947 |
|---|
| End bp | 820666 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642595620 |
|---|
| Product | histone family protein nucleoid-structuring protein H-NS |
|---|
| Protein accession | YP_001860027 |
|---|
| Protein GI | 186472685 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000396096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.523489 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAT TGGAAATCAT CCAGGCACGT ATAAAGAAAC TCCAGACGCA AGCCGAAGCA
CTCATTGCTA AACGGGCGCA CGGCGCGTTG AACCAGATTC GCGAACTGAT GATCAAGCAC
GGACTGACCA CCGAAGATAT CGAGCGGCGA GCCAAAGCGC GGCGCGAACG CTCGGAGCGG
CTACTCGGTA CCAAAACGGC ACGCGCGAAA CCCGCAACGG CGGCGAAGGG CAAATTGCCG
CCCAAATACC GCGATCCGAA GACGGGCGCA ACATGGAGTG GCCATGCTCG CCCGCCGGCA
TGGATCAAGG ACGTGAAAGA CCGTAGCAAG TTTTTGATCG ATGCGTCGGC GGCTGGTTCG
GAACCCGCTG TAGCGCTCAA GGCTGCAACA AAGAAAACGG CTAAGAAAGC CACCGCTAAG
AAGGCAGTAA CCGCAAAGTC GGCAGGCCGC AAGGTTGTGA AAAGCGCATC GGTGGCGGAC
GTGAAGACAG TTGCGAAGAA AGTTGCTGTG AAGTCCGCCG GCAAGAAGAC GGCAGTTAAA
AAGGCGGCTG CGAAATCTGC CGCGCCGACG CTTGGCAAGC GTGTCATTGC GAAGAAGGCT
GCGGCCAAGG CTCCGGCGAA AAAGGCGGCA GCAAAGAAGG CGCCTGCCAA AACCACCGCG
CCCGTCGTCG AAGCGCCCGT GACCGTACAG GCGCCCGCCG CTACGGCAGG CGAAGCTTGA
|
|---|
| Protein sequence | MATLEIIQAR IKKLQTQAEA LIAKRAHGAL NQIRELMIKH GLTTEDIERR AKARRERSER
LLGTKTARAK PATAAKGKLP PKYRDPKTGA TWSGHARPPA WIKDVKDRSK FLIDASAAGS
EPAVALKAAT KKTAKKATAK KAVTAKSAGR KVVKSASVAD VKTVAKKVAV KSAGKKTAVK
KAAAKSAAPT LGKRVIAKKA AAKAPAKKAA AKKAPAKTTA PVVEAPVTVQ APAATAGEA
|
|---|
| |