| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3838 |
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| Symbol | |
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| ID | 6245376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 809002 |
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| End bp | 810513 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642595608 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001860015 |
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| Protein GI | 186472673 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGCGT TGCCTGATTT GTTCGCCGCC TGCTGTTCGA ACTTCGATTC GCCGGCCCGC
CATCATGCGG GCGACCGCCG CGAAGGGCAG TGCAAGCGTC GCATCGCTGC CGTTGCACGC
GCCTTCAGTG CGGCTGCCGC GTGTGCCGCT TTGCTGGCCG GTTGCGTCGA TGTTCATATG
GCCGACTACA AGCGCCCCGA CACGCCCGCC AAGGCAGCGT GGTCCGACAA GACGGGCTCG
CTCGTGTCGC CCGCCGACAC CATCGTGCCC GACTGGTGGA AAGGCTTCCA TGACCCGTAT
CTGGATGACC TGATCGCCAA GGCGATCGCA GGCAACTTCG ACATCAAGGT CCTGGCCGCT
CGCATCGACG TAGCCGGTGC GCAGATCGGC GAGGCGCAGG CAGGTGCACT GCCTACGGCG
GATCTCGGCG CAGGCGCCAA CTTCCAGAAG GTCACGGGGC AGCCGTTCAC GAAGCAGTAC
AACGTGGCGG CCCAGGTTAA CTGGGACATC GACATCTGGG GCAAGGTGGA AAAAGGCGTA
CAGGCACAAA AGGCCGAATT CCACGCAACG GAAGCCGACT GGCGCGCGGG CTATCTCGAA
CTCGTGTCGA ATGTGGCGAC CACCTATTTC CAGATTCTCC AGTTCGACGA CCAGATCGTC
GCGCAACAGA AAATGGTCGA TGAGAACCGC ACCATTCTGT CGATCTATGA CGGTATGAGC
CGCAACGGCC TGATTCCGAA GACGCAGGTG ATGCGTCAAC AGGCGGAGGT CAATCGTCTA
ACCAAGGATC TGCTCGATTT GCGCCGTTCG CGCAGCCTTG CGAATAACGC GCTGTGCACG
CTGATCGGCG TACCGGCAGG CGAATTCACC GTGCCCGTCG GACACCTGCA GCAACGCGTG
CAATTGCCGC CCGTTCCGGG TGGGCTGCCT TCGCAGTTGC TGTCGCGGCG GCCCGATATC
GTCGCATCGG AATTGCGCGT GCTCGAAGCG TATAACCTGG TCGGCGAAGC CAAGCTCGCG
CAACTGCCGA CCATCAGCCT GACAGGACAT GGGGGCACGG CGAGCTTTGC GCTGTCCGAT
CTGCTGAAGT CGTTCACGTT CGGCTTCATG CCGAGCCTCA ATATTCCGCT GCTCGATCCA
GGTGTGCGGG CTCACGTGAA AACGACGGAA GCACAAACGA CAGTCGCCGA GCAGCAATAC
CGGCAAACGG TGATGGGCGC ATTCGAGGAA GTCGAGAACG CACTCGTCAA TCTGGATTCG
CACAAGCAGC AGCGCGTCGA ATTGCAGCAG GAAGTACAGC GCCTAAGCGT CGTCAACGAG
CAGATGCAGT CGCAATTGCG TGAAGGCATC GTGTCGCAAC TGGAAGTATT CGAAACGGAG
CGCACGCTGC TTCAAGCGCA ACTGGATCTG CTGACCAATC ACCAGCAAAT ACTGTCCGAC
ACGGTACAGC TTTACAAGGC GCTCGGCGGC GGCTGGCCCG CTGTCAACGT GCAGGCGCAA
GTGAAGGAAT GA
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| Protein sequence | MSALPDLFAA CCSNFDSPAR HHAGDRREGQ CKRRIAAVAR AFSAAAACAA LLAGCVDVHM
ADYKRPDTPA KAAWSDKTGS LVSPADTIVP DWWKGFHDPY LDDLIAKAIA GNFDIKVLAA
RIDVAGAQIG EAQAGALPTA DLGAGANFQK VTGQPFTKQY NVAAQVNWDI DIWGKVEKGV
QAQKAEFHAT EADWRAGYLE LVSNVATTYF QILQFDDQIV AQQKMVDENR TILSIYDGMS
RNGLIPKTQV MRQQAEVNRL TKDLLDLRRS RSLANNALCT LIGVPAGEFT VPVGHLQQRV
QLPPVPGGLP SQLLSRRPDI VASELRVLEA YNLVGEAKLA QLPTISLTGH GGTASFALSD
LLKSFTFGFM PSLNIPLLDP GVRAHVKTTE AQTTVAEQQY RQTVMGAFEE VENALVNLDS
HKQQRVELQQ EVQRLSVVNE QMQSQLREGI VSQLEVFETE RTLLQAQLDL LTNHQQILSD
TVQLYKALGG GWPAVNVQAQ VKE
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