| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3834 |
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| Symbol | |
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| ID | 6245372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 800892 |
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| End bp | 803948 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642595604 |
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| Product | cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter |
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| Protein accession | YP_001860011 |
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| Protein GI | 186472669 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter
[TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.823997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAC CGCAAACCAC GCCTTCCACT GCCGATTTTC TGTCGACGGT CGAGATTCTG
TCGCCGTTCA CGCGTGATGA ACTCGAACGC ATCGCAGAGC ATGTGCAATC GCGCTTCTAT
TCGTTTGGCG AAACGGTGTG CAACGCCGGC GACCCCGCGG ACGGCCTCTA TGTGATCAAG
ACCGGCTCGG TACGCATCTT CACCGAAGAG CACGGCAAAG AGATCAGCAT GGGCGTGCGC
AAGACGACTG AAGTCTTCGC CGATATCGCG ATGCTGCGCG CCTACGTGCA TGAATCGTCC
GTGCGTTCGT CGGGCAAGAC CGAGTTGCTG TTCATTCCGC GCGCGGCGAT CGAGCCGATC
ATCGCCGGGA ATCCGTCGGC ACTCGCATTC GTCGCGAGCT ATGTCGCGAT CAATTCGGCG
GGAGGGTTCG TTGCCCAGCT ATTCGATCTG CGCGGCAAGC TGAACAAGCA GGAACTGGAA
GAGTACGTGC GCAGCGTGGG CGTCAAGCGG GTCGCCGCAG GCAAGGAGAT TCTCAGGCAG
GACGCGCGCG ACGACCGGCG GCTTTATGTG GTGCGGCAGG GCGAAGTGCG CATCGTGCGC
CACGAAGACG GCAACGACTA CACGCTCGCA ACGCTGCGCG AAGGCGAGAT TTTCGGCGAG
AAGGCGTGCC TGATGCGGCA GGAGCAGACG GCTTCGGCAA TCGCCACGAC GGATACGCGG
CTGCTCGTCA TCCCCGAGCG CACGGTGCAT TTCATCCTCG AACGCAATCC GAAACTGCGC
GAGGTGCTCG ACGAACGCAT CAAGTACGCC GACCGCGAAC TGGACCGGCA AAAGCGCATC
GAGCAGCGGC GCAAGCTGCC GCTGCGACTT GACCTGCACA CGAAGCCGGA GATGGGCGAG
CGCGTGATCC GCCGCTTCGG CCTCGTCGAA CAGGCGGAGG AGATGGATTG CGGCGCCGCG
TGTCTCGCGA TGATCTGCAA GCACTACGGC ATTCCGATGA CGCTGGGCAA GCTGCGCGAA
CTCGCCAATG TGACTACGCA AGGCGCGACA CTCGACAGTC TCGCGCGTGC AGGCGAATCG
CTCGGCTTTT CGGCCCGCGG CGTGCAGTGC ACGTTCGATT CGTTGCGTGG CTTCGATCTG
CCGTTCATCG TGCACTGGGA GGGCTATCAC TACATCATCG TGTATGGCGT ATCGAAAGAT
CATGTGTGGC TCGCCGACCC TGCTTTGGGC TTCCGCAAGC TGAGCCTCGA AGACTTCGAG
CGCGGCTGGA GCGGCACGTG TCTATTGTTC ACGCCCGGGC CGAATCTCGT GCAGCTATCG
GCGTCGCGTT CGCCGTGGTT GCGCTTTATC GGCTATCTGA CGCCGTATAA GAAGATCTTG
CTGCATCTGT TTCTCGCGAC CTTCGTGATT CAGGTGCTGG GCGTGATACC GCCGTTGATC
ATCCAGAACA TTCTGGATGG CGTGATCGTG CATCAGAACA TCAGCCTGCT GCATCTGCTG
ATACTCGGGC TGATCATTTC GAACGTGTTC TCGCAGCTGA TGTCGATGAT CCGCGCGTAC
CTGTCGAACT TCATGGTGCG CAACATGGAC TTCGCGATGA TGTCGCAGTT CTTCAGGCAC
ACGATGTCGC TGCCTTTCTC GTTCTTTGCC AAACGCAAAA CAGGCGATAT CTTCGCGCGC
TTCCAGGAAA ATCAGACGAT ACGCGCGTTC CTGACCGAGT CGACTGTGAC GACGGCGCTG
AATCTGCTGA TGGTGTTCAT CTACTTCGCG ATCATGTTCT TCTACAACGC GAAAATGACC
TTCGTGCTGA TCGCTTTCGT CATCCCCATC ATGGCGCTCA CGTTGATCGC GACGCCCAGG
ATCAAGAACT ATGCGCGTGA GACGTTCGCT GCTGCGACGG ATTCGAAGTC CTTTCTGATG
GAAGCGCTGT CGGGCGTCGA AACGGTGAAA GGCATGGGCA TCGAACGGCC CGTCCGCCTG
CGCTGGGAAA AGAAGTACGC GAAAGCGCTC GAAGTGCAAT ACCGCGCGCA CGCATTCAAC
ATTCTGATCG GCTTTATCAG TCAGTTGCTG AACGCGGCGA CGACCATAGC GATTCTTTGG
GTCGGCGCGA ATCTCGTGCT CGCGCGTGAA ATGACGATCG GTCAGCTGAT CGCCTTCAAC
GCATTCATGG GCAGCGTGCT GTCGCCGCTG ATGGGGCTGG TCGGTTTGTG GAGCATGCTC
AACGACGCAG GCGTCGCGAT GGAGCGGCTG GGCGACGTGC TGGATATCGA GCCCGAGCAG
AAGCCCGAGG ATCTCCCTTC ACGCGTGATG CTGCCTGACC TGCAAGGCGA GATCGGCCTG
AACGGCGTCT ACTTCCGCTA TGGCGACACT GACAGCGCCT ATGTGCTCGA GAACATCAGC
TTCGACATCA AGCCGGGCGA GCTCATCGCC ATCGTCGGCC GCAGCGGGTC GGGCAAGACC
ACGCTTGCCA AGCTGCTGGT CGGTTTCTAT ACGCCCAGCG AAGGCAAGAT GACCGTCGAC
GGTTACGACA TGAACGTGAT CGACAAGGCG TTCTACCGCG CGCAGATCGG CTATGTGATG
CAAACCAATC TGCTGTTCTC GGGCACGATT GCGGAGAACA TCGCGAGCGG CGACGACACG
CCTGACCGGC GCCGCATCGA GGAGGTGGCG AAGATGGCCG ACGCCCATGC ATTCATCGCG
AAGCTGCCGC TGGGCTATGA ACAGATCGTG GGAGAGCGCG GCATCGGTCT GTCGGGTGGG
CAGATACAGC GGCTGTGCAT TGCGCGTGCG CTGTATCACG ATCCGCGGCT GCTCGTGTTC
GACGAAGCGA CCTCGGCACT CGACACGCAG TCGGAAAGCA ATATTCTCAG CAACATGCAC
GACATCCTCA AGGGGCGCAC GGCCGTCATC ATTGCGCACC GTCTCAGCAC GATCATGCGC
GCCGACAAGA TTCTGGTGCT CTATGAAGGC GCAATCGTCG AACAGGGGCG TCATGAGGAA
CTGGTCAACC GGAAGGGCAT GTACTACCAG CTCGTCCAGA AACAGCTGAG CGCATGA
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| Protein sequence | MDAPQTTPST ADFLSTVEIL SPFTRDELER IAEHVQSRFY SFGETVCNAG DPADGLYVIK
TGSVRIFTEE HGKEISMGVR KTTEVFADIA MLRAYVHESS VRSSGKTELL FIPRAAIEPI
IAGNPSALAF VASYVAINSA GGFVAQLFDL RGKLNKQELE EYVRSVGVKR VAAGKEILRQ
DARDDRRLYV VRQGEVRIVR HEDGNDYTLA TLREGEIFGE KACLMRQEQT ASAIATTDTR
LLVIPERTVH FILERNPKLR EVLDERIKYA DRELDRQKRI EQRRKLPLRL DLHTKPEMGE
RVIRRFGLVE QAEEMDCGAA CLAMICKHYG IPMTLGKLRE LANVTTQGAT LDSLARAGES
LGFSARGVQC TFDSLRGFDL PFIVHWEGYH YIIVYGVSKD HVWLADPALG FRKLSLEDFE
RGWSGTCLLF TPGPNLVQLS ASRSPWLRFI GYLTPYKKIL LHLFLATFVI QVLGVIPPLI
IQNILDGVIV HQNISLLHLL ILGLIISNVF SQLMSMIRAY LSNFMVRNMD FAMMSQFFRH
TMSLPFSFFA KRKTGDIFAR FQENQTIRAF LTESTVTTAL NLLMVFIYFA IMFFYNAKMT
FVLIAFVIPI MALTLIATPR IKNYARETFA AATDSKSFLM EALSGVETVK GMGIERPVRL
RWEKKYAKAL EVQYRAHAFN ILIGFISQLL NAATTIAILW VGANLVLARE MTIGQLIAFN
AFMGSVLSPL MGLVGLWSML NDAGVAMERL GDVLDIEPEQ KPEDLPSRVM LPDLQGEIGL
NGVYFRYGDT DSAYVLENIS FDIKPGELIA IVGRSGSGKT TLAKLLVGFY TPSEGKMTVD
GYDMNVIDKA FYRAQIGYVM QTNLLFSGTI AENIASGDDT PDRRRIEEVA KMADAHAFIA
KLPLGYEQIV GERGIGLSGG QIQRLCIARA LYHDPRLLVF DEATSALDTQ SESNILSNMH
DILKGRTAVI IAHRLSTIMR ADKILVLYEG AIVEQGRHEE LVNRKGMYYQ LVQKQLSA
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