| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3833 |
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| Symbol | |
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| ID | 6245371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 799543 |
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| End bp | 800895 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595603 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001860010 |
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| Protein GI | 186472668 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.859471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA TACTTGACCA GCAGCCCGAT GAAAGCGGCT CGGCCCTCTC CTATGCGGGC
CTGATCGAGA AGATCGAGAT TCTGCGCTCG ACGCTGCGCT GGTCGTCGCG GCTTGAACGC
GCGGATATCG AAAAGCTCCT GAAACAGGCA AGTTCGTTGC GCGATGAAGT CATGCAGATG
TCGCACAAGG AGCGCTTCGT GCAGGCGGCC GTCGTCGAGC CGTTGCGCGG CGACCAGTCG
CGCGGCGCGC GACGCCAGGC GCTGCTCGCG CGCAGCTTCA TCTTCGAGGG CACCTTCGGC
GACAACCCGA AACTGCTGGA AGCGCTCGAA ATCGCCGAGA AGGCTGCGCC GACCGATCTG
CCCGTGTTGA TCGACGGCGA GAGCGGCACG GGCAAGGAAC TGATGGCAAA GGTGATTCAC
GCGAACGGCA GCCGCTCGGA CAAACCGTTT ATCTCCGTCA ACTGCGGCGC GATTCCTGAG
AACCTGCTGG AGTCGGAACT GTTCGGGCAC AGAAAGGGCG CTTTCACGGG CGCAACGAAC
GACCGCAAAG GCAAATTCGA GAGCGCGCAC ACGGGCACGA TCTTTCTCGA CGAAATCGGC
GAGTTGCCTC TGACGGGGCA GGTGAAATTG CTGCGCGTGC TGGAAGCGCA CGAAATACAG
CGCGTCGGGT CGGACGAACC GATCGGCGTC GACACGCGCA TCGTCGCGGC GACCAATCGC
AACCTGCGCA AGCTGAGCGA ACAGGGCACC TTCCGCGAAG ATCTGTTCTA CCGGCTGAGC
GTCATCCACG TAACATTGCC GCCGCTGCGC GAAAGGCGCG ATGAGATTCC GTTGCTGATC
CAGTACTTCG GCGATGAAGC GGCGGGCGCG CTGAAACGCC GTCCCGTCAG AATCACGCCT
AAATTAAGGG ACTTTCTGCT GACGTATGCG TATCCGGGCA ATATCCGGGA ACTGCGCAAC
GTGATGTACC GCATCTCGTG TCTCGCGGGC GATATTGCCG ACGTCGATCA TCTGCCGACA
GACATGCGGC CCACGCCGCC CGTTTCCGCG TCGATGTTCG GGGGCGCGAA CGAGGCCGCG
AATGGCGCCG CAAATGTGAG GAACCTGCTG TCGCTCAGCG ACGCGAAGCG CGCCGCCAGC
GACGAAGCAG AAAAGGCCTT CCTGCAGCGC GGCTTGCAGG AAGTCGGCGG GACGGTCGCG
GAACTCGCGC GCCGCGTGGA TATGAACCGC TCGCATCTTC AGATGTTACT GAAGAAGCAC
GGTCTGCATT CGAAGGACTT CCGTCGCGCA CACGCGCAGG CGAATGCGCG CAAGGACGAC
GAGGAAGCGA ACGACGAAGC CGATATAGGA TGA
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| Protein sequence | MMKILDQQPD ESGSALSYAG LIEKIEILRS TLRWSSRLER ADIEKLLKQA SSLRDEVMQM
SHKERFVQAA VVEPLRGDQS RGARRQALLA RSFIFEGTFG DNPKLLEALE IAEKAAPTDL
PVLIDGESGT GKELMAKVIH ANGSRSDKPF ISVNCGAIPE NLLESELFGH RKGAFTGATN
DRKGKFESAH TGTIFLDEIG ELPLTGQVKL LRVLEAHEIQ RVGSDEPIGV DTRIVAATNR
NLRKLSEQGT FREDLFYRLS VIHVTLPPLR ERRDEIPLLI QYFGDEAAGA LKRRPVRITP
KLRDFLLTYA YPGNIRELRN VMYRISCLAG DIADVDHLPT DMRPTPPVSA SMFGGANEAA
NGAANVRNLL SLSDAKRAAS DEAEKAFLQR GLQEVGGTVA ELARRVDMNR SHLQMLLKKH
GLHSKDFRRA HAQANARKDD EEANDEADIG
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