| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3825 |
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| Symbol | |
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| ID | 6245363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 792469 |
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| End bp | 794148 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642595595 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001860002 |
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| Protein GI | 186472660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG CGGTGCCGCG TGTACGTGCC GATTCGATGC GCCGATCAAC TCCTTATTTC
TCCGCCATGC TGCCTACTTT CGATCCGTTT CTCGCCTTCC TTCGCTATGC GGCCGCTGCG
CAGTCGGGCG GCGATGCGCG AGCGCGTGCG CTGTGGCTCG AGGCCGCGTC CTGCCTCCAC
GCGACGGATA ACGCGTCGAT CGACGGGCTG ATGCTCGACC TGCTCGAACA GCAGCAGTTC
GAGCAGGCGG TGTCGCTGGT CGAGGCCGTC GCGCAACTCG AACCGCACAG CGCAGCCGCA
AACATGCGTC TCGGCTACGC GATGCAGATG GCCAGCCGCG ATCGCGATGC GCTCGCGCCG
TATCGTCGTG CGCTCGCGAT CGACCCTGCG TTTCCGCAAT TGCGCAAAAA CCTCGCGATC
GCGCTGAACC GCACGGGCGC CGATCCCGTG CAAGAGCGGG AGATGCTCGA AGCGGCCGTC
GCAGCGGCCC CGTCCGACCT CGCGCTGTGG CTCAACCTGA TGCCTGCGCG GCGCGCCTGC
TTCGATCTCG AAGGATCGCT GGCGGCGGCG GAGCGTGCTG TCGAGCTCGA TCCGCAGAGC
GCGATCGCGC ATGGCAATCT CGCGCAGGCG CTGAAGGAGT CGCAGCGCTG GGACGACGCG
CTGGATCACG CGAACAAGGC CTGTGCGCTC GCTCCCGGCA ATCCGTCGCT GCGCACGGCG
CTCGGCGTGC TGCATCTGCT GCGCGGAGAA TACGCGCAAG GCTGGCCTGC GCACGAAGCG
CGCTGGAGCG ACCCGGCGAG CATGCTGACG GAAGGCCGTC CGCTGTTCGG CAGGCCGCAA
TGGCGCGGCG AATCGCTCAA GGGCAAGACT TTGCTCGTGT GGGGCGAGCA GGGCATGGGC
GACGTGCTGC AGTTTTGCCG CTTCATTCCG CTTCTGGCGC AGCGCGTGCA TCGCGAGGGC
GGGCGGATCG TCTGGAATTC GTTTGCGCAT ATGGGCGCGC TGCTGCCGCG CAGTTTCGCG
GAACACATCG ATGCGTACTC CGTCACGCGC GACCTCGAAT CGTTGCCGAT GTTCGATTTC
GAATTGCCGC TCGTGAGCGC GCCGCTGATG CTCGATACGC GCGTCGAATC GATCCCGCGA
GACGTGCCGT ATCTGCGCGC GGACGCGGAC GCTCGCGCGG CATGGCGCAC GCGTCTCGCC
GATGAAAAGC GTCTAAAGGT CGGGCTCGCG TGGACGGGCA GCGTGAATCA CGGACGCAAC
CGCTTTCGCC GCGTCGGCCT GGAGCGTTAC GCGCGGGCGT TTCGCGATCT CGACGGCGTC
GCGTTCTATT CGCTGCAGCC CGGCGCAACG GCCGATGTCG ACGCGGCCCG CGCAGCCGGT
CTGCCCATCG CCGACTTCAC GCATGAATGG CGCAGCTTCG ACGATACGGC CGCGTTCGTC
AGCGAACTGG ATCTGGTGAT CAGCGTGTGC ACGTCGGCGG CGCACCTCGC GGGCGCGCTC
GGGCAGCGTA CGTGGGTGGT GCTCGACGTG AATCCGTACT GGACCTGGAT GACGGACAGG
CGCGACAGCC CGTGGTATCC GACGGCCACG CTATACCGGC AGCGGCAATT CGGAGCGTGG
CAACCGGTGA TGGCCGAAGT CGCACGCGAC CTGCGCGCGC TGGCTGCAAG CGGCGTCTGA
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| Protein sequence | MADAVPRVRA DSMRRSTPYF SAMLPTFDPF LAFLRYAAAA QSGGDARARA LWLEAASCLH
ATDNASIDGL MLDLLEQQQF EQAVSLVEAV AQLEPHSAAA NMRLGYAMQM ASRDRDALAP
YRRALAIDPA FPQLRKNLAI ALNRTGADPV QEREMLEAAV AAAPSDLALW LNLMPARRAC
FDLEGSLAAA ERAVELDPQS AIAHGNLAQA LKESQRWDDA LDHANKACAL APGNPSLRTA
LGVLHLLRGE YAQGWPAHEA RWSDPASMLT EGRPLFGRPQ WRGESLKGKT LLVWGEQGMG
DVLQFCRFIP LLAQRVHREG GRIVWNSFAH MGALLPRSFA EHIDAYSVTR DLESLPMFDF
ELPLVSAPLM LDTRVESIPR DVPYLRADAD ARAAWRTRLA DEKRLKVGLA WTGSVNHGRN
RFRRVGLERY ARAFRDLDGV AFYSLQPGAT ADVDAARAAG LPIADFTHEW RSFDDTAAFV
SELDLVISVC TSAAHLAGAL GQRTWVVLDV NPYWTWMTDR RDSPWYPTAT LYRQRQFGAW
QPVMAEVARD LRALAASGV
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