| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3812 |
|---|
| Symbol | |
|---|
| ID | 6245350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 776767 |
|---|
| End bp | 777312 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595582 |
|---|
| Product | amine dehydrogenase |
|---|
| Protein accession | YP_001859989 |
|---|
| Protein GI | 186472647 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02659] methylamine dehydrogenase light chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.701995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTTT TTGATTCGTG GTTCGAGAAG TCGGCGCGCG GCGTCGCGCA GCGCAGTTCA
CGGCGCAGCG CGATGGCGAA GCTCGGCAAG GTGCTGGTCG GCTCGGCGAT GCTGCCGCTG
CTGCCCGTCG ATCGCACTGC TTATGCGGCC GATGCGGCTT CGGGCGCATC GGCCGCATCG
GGCGCAGCAG TGCCGGGCGC CAGCGACGAT GCGATGAGCT GCGATTACTG GAAATACTGC
GCGATCGACG GATGGCTGTG CAGCTGCTGC GGCGGCACGT CGAGCAGCTG CCCGCCGGGC
ACGACGCCCT CGCCGATTAC CTGGATCGGC ACCTGCCGCA ATCCGCATGA CGGCTCCGAC
TACATCGTGT CGTACAACGA CTGCTGCGGC AAAACCTCGT GCGGCAAGTG CTTCTGCAAC
CGCAATGAAC GCGAGAAGCC GCTGTACAAG CTGTCGCTCG ACAACGACAT CAACTGGTGC
ATGGCCAACG GCAACTCGAA CTATCACTGT TCGGTGTCGG TCCTGCTTGG AGCCGCAAAG
CAATGA
|
|---|
| Protein sequence | MGVFDSWFEK SARGVAQRSS RRSAMAKLGK VLVGSAMLPL LPVDRTAYAA DAASGASAAS
GAAVPGASDD AMSCDYWKYC AIDGWLCSCC GGTSSSCPPG TTPSPITWIG TCRNPHDGSD
YIVSYNDCCG KTSCGKCFCN RNEREKPLYK LSLDNDINWC MANGNSNYHC SVSVLLGAAK
Q
|
|---|
| |