| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3762 |
|---|
| Symbol | |
|---|
| ID | 6245300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 723690 |
|---|
| End bp | 725639 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642595532 |
|---|
| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
|---|
| Protein accession | YP_001859939 |
|---|
| Protein GI | 186472597 |
|---|
| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTACG TCTCTCAGTC GCAGCATATC GACCGCGTGC GCGGCGCCAT CGAAGGACGC
CTGCCCGCGC CCGGCAATTC GTCACGCCTC GTCTCGTCCT GGCAGCGTTC GTATGAGCAA
TACCGGCTCG ATCCCGGTTC GGTGATCGGG CCGCGCGTGC TGACGTCGTC TGAGTTGCGC
GATGTGCAGG GCAAGGAGGA AGCGTTCTTG CGCGCATCGG GCCAATGCCT CGCGCGGCTT
CACGACATGA TCCGCATGGC CGACTACTGT GTGATGCTCA CCGACGCACA CGGCGTCACG
ATCGATTACC GCATCGATCG CGACCGGCGC GGCGATTTCA AGCATGCGGG CCTCTACATC
GGCTCATGCT GGTCGGAGCG CGAAGAAGGC ACCTGTGGCA TCGCGAGCGT GCTCACGGAT
CTTGCGCCCA TCACCGTGCA CAAGACCGAT CACTTTCGCG CTGCATTTAC GACGCTCACG
TGCAGCGCAT CGCCGATCTT CGCGCCGACG GGCGAACTGA TCGGCGTGCT CGACGCGTCC
GCCGTGCAAT CGCCCGATAA CCGCGACAGC CAGCGGCTGG TGTTTCAACT CGTGCGTCAG
AGCGCGGCGC TGATCGAGGA CGGTTACTTT CTCAACCAGA CCGCGCAGCA CTGGATGATC
TTCGGTCACG CAAGCCGCAA CTTCGTCGAA GCACAGCCGG AGGTGCTGAT CGCGTTCGAC
GAATGCGGCA ACATCGCCGC GTCTAACCGC AAGGCGCAGG AATGCATCGC GGGCCTGAAC
GGGCCGCGTC ACGTCGACGA AATCTTCGAT ACGTCAGCCG TGCATCTGCA CGACGTGGCG
CGCACCGATA CGATCATGCC GCTGCGTCTG CGGGCGACGG GCGCCGTGCT CTATGCGCGT
ATTCGCGCGC CGCTCAAGCG TGTTTCGCGC AGTGCCTGCG CAGTATCCCC TTCTCATTCG
GGCCAGGGCA CGCACGATGC GCACAATGAC ACCAACCTCG ACGCCATCAG CCGCTTTCTG
CACAGCCGCG ACTCGCGTAT CGCGCGCAAT GCGGAAGTCG CGCTGCGCAT CGCGGGCAAG
CATCTGCCTA TTCTGATTCT CGGTGAGACG GGTGTTGGCA AGGAGGTGTT CGCGCAGGCG
CTGCATGCGT CCGGGGCACG GCGCGCGAAG CCCTTCGTCG CGGTGAATTG CGGCGCGATT
CCCGATTCGC TGATCGAAAG CGAACTGTTC GGCTATGCGC CGGGGGCGTT CACGGGCGCG
CGCAGCCGCG GCGCGCGCGG CAAGATCGCG CAGGCACACG GCGGCACACT GTTTCTCGAC
GAGATCGGCG ACATGCCGCT CAATCTGCAG ACGCGTCTGC TGCGCGTGCT GGCCGAAGGC
GAAGTGCTGC CGCTCGGCGG CGATGCGCCC GTGCGCGTGG ATATCGACGT AATCTGCGCG
ACGCACCGCG ATCTGGCGCG CATGGTCGAA GAAGGCACGT TCCGCGAAGA CCTGTATTAC
CGGCTGAGCG GCGCAACACT GCATATGCCG CCGCTGCGCG AACGCGCCGA TATTCTCGAC
GTCGTGCACG CCGTGTTCGA CGAAGAAGCG CAAAGCGCGG GGCACGTGCT CACGCTGGAT
GGACGGCTCG CGGAGCGTCT CGCGCGTTTC TCGTGGCCGG GCAATATCCG GCAACTGCGC
AACGTGCTGC GCTATGCGTG TGCCGTGTGC GATTCGACGC GCGTGGAATT GCGGCACGTT
TCACCCGATG TGGCTGCATT GCTCGCGCCC GACGAAGCGG CTTTACGGCC TGCGCTGGCG
CTCGAAAACG ACGAGCGCGC GCGGATCGTC GATGCGCTCA CGCGGCATCA TTGGCGGCCG
AATGCAGCAG CCGAAGCGTT GGGCATGTCA CGCGCGACGT TGTATCGAAG GATTGCGAAG
CTGGGGATCG TCGGGCCGCA TCGCAGTTGA
|
|---|
| Protein sequence | MPYVSQSQHI DRVRGAIEGR LPAPGNSSRL VSSWQRSYEQ YRLDPGSVIG PRVLTSSELR
DVQGKEEAFL RASGQCLARL HDMIRMADYC VMLTDAHGVT IDYRIDRDRR GDFKHAGLYI
GSCWSEREEG TCGIASVLTD LAPITVHKTD HFRAAFTTLT CSASPIFAPT GELIGVLDAS
AVQSPDNRDS QRLVFQLVRQ SAALIEDGYF LNQTAQHWMI FGHASRNFVE AQPEVLIAFD
ECGNIAASNR KAQECIAGLN GPRHVDEIFD TSAVHLHDVA RTDTIMPLRL RATGAVLYAR
IRAPLKRVSR SACAVSPSHS GQGTHDAHND TNLDAISRFL HSRDSRIARN AEVALRIAGK
HLPILILGET GVGKEVFAQA LHASGARRAK PFVAVNCGAI PDSLIESELF GYAPGAFTGA
RSRGARGKIA QAHGGTLFLD EIGDMPLNLQ TRLLRVLAEG EVLPLGGDAP VRVDIDVICA
THRDLARMVE EGTFREDLYY RLSGATLHMP PLRERADILD VVHAVFDEEA QSAGHVLTLD
GRLAERLARF SWPGNIRQLR NVLRYACAVC DSTRVELRHV SPDVAALLAP DEAALRPALA
LENDERARIV DALTRHHWRP NAAAEALGMS RATLYRRIAK LGIVGPHRS
|
|---|
| |