Gene Bphy_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3712 
Symbol 
ID6245254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp661899 
End bp663251 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content66% 
IMG OID642595482 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001859893 
Protein GI186472551 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.40893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCG CATACCTCGC GCGCCTTTGC ACGGCGGTTT TCCTGCGAGC GCTGTTGCAG 
CGCAAACGGG ATACCCGGCG GAGCCAACGC CGGCGAGGCA CGGCGCTATA CTGTGTGCCC
GTCTCTATCC GACGACATAA CAAATTGGCA GATCACGATC TGAAGCGGCT GAAAATCGAC
CGGCCCGCCG TCGCCACGGG CGGCCGCCGG CGTAACTGGA TCGGCTACGG GGCCGTCGCG
CTGATCGTCA TCGGCGCGCT CGTCTTCGGG CTCCGGCTCG CCGGGCCGCA ATCCGTCGAG
ACCACGACCG TCGTCTCGGC CTATCCTTCG CAAACCTACA CGCTGCTCAA CGCGACAGGC
TACGTCGTGC CCCAGCGAAA GGCCGCCGTT GCGTCAAAGG CGCAAGGGCG GCTGGAATGG
CTCGGCGTGC TGGAAGGCAC GCGCGTCAAG AAAGACGAAG TGATCGCGCG CATCGAGAGC
GCGGATGTGT CGGCGTCGCT CGCGCAGGCG AAGGCGCAGG TCAAGGTCGC GCAAGCGAAC
CTTGCGCTGC AGCAGGCCGA ACTGAAGAAC GCCGAAATCA ATCTGCGCCG CTCGAAGATT
CTCGCGCCGA ACGGCGCAAT TCCTGCGACG CAGTACGACG CCGATCTCGC GCGCTACGAC
AAGGCGGTCG CCTCGATCGA CAACAGCCGA GCCGCGATCG TGTCCGCACA GGCGAATGCG
CAGGCTGCGC AGGTCGCCGT CGATCAGACC GTGATCCGCG CGCCTTTCGA CGGCGTCGTG
ATCGAGAAAC ACGCGAACGT CGGCGACAAC ATCACGCCGT TTTCGCAGGC GTCGGACAGT
AAAGGCGCCG TCGTGACAAT CGCCGACATG GACACGCTGG AAGTCGAAGC CGACGTCGCG
GAATCGAACA TCGCGAAGAT TGCCGTGAAC GCGCCGTGCG AGATCCAGCT CGACGCGCTA
CCCAACGTGC GCCTCGCGGG CAGTGTGTCG CGCATCGTGC CGACCGTCGA CCGCTCGAAG
GCGACCGTGC TCGTCAAGGT GCGTTTCGTC GATCATGACG CTCGCGTGCT GCCCGACATG
AGCGCAAAGA TCGCGTTCCT GTCGAAGCCG GTGCCGCCTG AAGACCGCAA GCCGGTCGTG
GCCGTGCAGC CGGCCGCCAT TGTCGAGCGC AATGGCCGCA AGGTCGTGTT CGTCGTCAAG
GACGACACCG CGCGCGAAGT CCCTGTCACG ACGGCGCAGA CGCTCGGCGA ACTGGTCGCG
GTCAGCGGCG TGCGTCCCGG CGACGTGCTG GTGCGTGCGC CGAACGAGCA CATCAAGGAC
GGCGCCAAGG TCTCCGTGGC GAAGAAACAG TGA
 
Protein sequence
MPFAYLARLC TAVFLRALLQ RKRDTRRSQR RRGTALYCVP VSIRRHNKLA DHDLKRLKID 
RPAVATGGRR RNWIGYGAVA LIVIGALVFG LRLAGPQSVE TTTVVSAYPS QTYTLLNATG
YVVPQRKAAV ASKAQGRLEW LGVLEGTRVK KDEVIARIES ADVSASLAQA KAQVKVAQAN
LALQQAELKN AEINLRRSKI LAPNGAIPAT QYDADLARYD KAVASIDNSR AAIVSAQANA
QAAQVAVDQT VIRAPFDGVV IEKHANVGDN ITPFSQASDS KGAVVTIADM DTLEVEADVA
ESNIAKIAVN APCEIQLDAL PNVRLAGSVS RIVPTVDRSK ATVLVKVRFV DHDARVLPDM
SAKIAFLSKP VPPEDRKPVV AVQPAAIVER NGRKVVFVVK DDTAREVPVT TAQTLGELVA
VSGVRPGDVL VRAPNEHIKD GAKVSVAKKQ