Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3678 |
Symbol | |
ID | 6245220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 626469 |
End bp | 627725 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642595448 |
Product | diguanylate cyclase with GAF sensor |
Protein accession | YP_001859859 |
Protein GI | 186472517 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.313961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACTGC GCGTCCGGTG TATAAAGCGG ACGTCGTTGC GGTTGGTTGA AAGCAAGAAA CAGGTTGCAA CCGGGGTCGC AACGGTCGGC CTCAAGCAAA CGCACATCGA GGCCGATAAC CAGACGTTGG GCCCCGCAGC GGGCCGCAAT GCAACGGCCC CAATGAGCAC AACACACACG CCCCACTCCG TCCGTCTTCG CGCACTCGTC GATACAGTGC AACGCAATGA ACGCACGTTG CGCCGCTTCC AGGATGTCGA ACTTCATCTG ATCCGCGCAC AGGATTTTCA GGCGCTTTGC AGCGTGCTGT TCGACTATCT GCCGCGCGAG TTCGGACTGG AGCGTGTGAT GCTCTGGCTC AACGACACGT TGCCGCTGCT CCATGAGATG GCCTCGCGTC ACGTGACTCC GCCGACGGCC GGAAGCCCGG CAGGGTCGCT GAATACGTCG CGTGAAACCG GCGACGCGGC GACGCGACTG TGTGCACAAG GACGTCCGTG GCTCGGTGCG TGCGCGTCGA TGGACGATGC GGCGCGCGAC GCGCTCCGTG CCGGCGACAT GCCGGCGGCC AGCATCGCGC TGCTGCCGCT CGCCGCGAAC GGTCTGTTGA GCGGCTATCT GTGCCTCGGC AGCGACAACG CAAGCCGTTT CGCCGCAGGG ATGGCGACCG ACATGCTGGA ACGCTTCGCC GTGATCGTGG CGGCGAGCCT CGACAATGTC GCGCATCGCG AGCAGCTCGA ACGGCTCGGC GCAACCGATG CGCTGACGGG TCTGCCCAAC CGCCGCTATT TCGACGAGCG TTTGCGCGAG GAGACGATGC GTGCGTCGCG TTACCGTTTG CCGCTCGGCT GTCTCTTCAT CGATATCGAC GGCTTCAAGC CGATCAACGA TGCGCACGGC CATGCAATCG GCGACCGCGC GCTTGCGCTG GTCGGCGCAT GTCTGCGCAA GCAGACGCGC CTCGGCGACA CTATCGCGCG ATACGGCGGC GAAGAATTCG CCGTGCTGCT GCAAGGTGAC CTGAAGGACT CGCTGGCTGT GGCCGAACGC ATGCGCACGG CCGTCGCGCA ACTCGAGCTG CACGACAATG GCGGCGCGCG CATTCCGCTT ACGGTGTCGA TTGGCGCCTC TGCACATGCG ATGCAGTCTG GGTCTGATCT CGACCGGCTC GGGCGCACGC TCGTCGACGA AGCGGACCGC GCGATGTACA AGGCAAAAGC CGACGGACGC AATCGCGTGG TGACGCTCGT CACCTGA
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Protein sequence | MKLRVRCIKR TSLRLVESKK QVATGVATVG LKQTHIEADN QTLGPAAGRN ATAPMSTTHT PHSVRLRALV DTVQRNERTL RRFQDVELHL IRAQDFQALC SVLFDYLPRE FGLERVMLWL NDTLPLLHEM ASRHVTPPTA GSPAGSLNTS RETGDAATRL CAQGRPWLGA CASMDDAARD ALRAGDMPAA SIALLPLAAN GLLSGYLCLG SDNASRFAAG MATDMLERFA VIVAASLDNV AHREQLERLG ATDALTGLPN RRYFDERLRE ETMRASRYRL PLGCLFIDID GFKPINDAHG HAIGDRALAL VGACLRKQTR LGDTIARYGG EEFAVLLQGD LKDSLAVAER MRTAVAQLEL HDNGGARIPL TVSIGASAHA MQSGSDLDRL GRTLVDEADR AMYKAKADGR NRVVTLVT
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