| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3640 |
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| Symbol | |
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| ID | 6245183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 592381 |
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| End bp | 595206 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642595410 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001859822 |
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| Protein GI | 186472480 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACG AACGTTTCCC CTTTCTGTAC AGGGCACCCG CACGCACGCT TTCGATAAGC
GGGGATGCTC TCCCGACATG GACGCCACCT CGCGTCAACA TCAAATTCGA GGAGTCGCCC
AAACCAGTGC TGATTCCGAT CTATCTACAT GGCCGCGAGG CGATAGGCGA ACTCTTTAGC
TACACCGTCC GCATGCGAAC GGACATAGAC ATACCTTCGT TTCCCGACAA CACCACGATT
GACCTGGACA GCATCGTTGG AACTCAGGTC ACGATATTCA TAGACGTTCC GGGCAAGGCG
ACTCCCATTC CCGGCATGCC TGGCGACACA GGACGCGGCA ACATTGGTTT TTATACGCGC
GAGATTACCG GACGCGTCAG CGCGGCCCGG TTTGTACGCC GTGACGGCCG ATCCATGGTT
TATGAATTCG AGGTTGAGCC CGCATTGGCC GAAGCCGCCA AAGGTAGCAA CTACCGGATT
TTCATGGGCG AAACTGTCAC GGACGTTATC GGCAAGATTC TTGGAAATTA TCCCATCGCA
ATTGACTGGC GCATTGGCGG ACCGCATTAC GGGAAGCGGG TATATCCACG GCGCGACCTG
ATACGTCAAC ACTGGGAAGC AGACATGACC AGTGTACAGC GCCTGTGTGA GCACTACGGG
CTGTTCTACT GGTTCGAGCA CGAAAACGGC TTTCACCGGA TCGTCATTGC CGACACCATG
GGCGCATTTC ACCCGCACGG TGAAGCCTAT GAGCAGATCC GCTTTTCAAC CAATGACCGC
ATTGACGAAG AACACGTCGA CCGCCTTGAC GTAACGAGCC GTCAGACCGA AGGCAAGATT
ACCGTTGTCG ATCATGACTA CACGGAGCCT CGTGTCGCGC CCTCGACAGT CCCTCTGCGT
GAGGATTTTC GCGACCCGCG TGACACTGCG CGGGCCGACC AAGAGGTCTA TACGTATGCG
AATGTGAGCC AGCCGCGTCT CGAGGAGGCG CGATTTGACT CCACTCCCGA AGACACCCGC
GACGATGCAC GTAATGTTGC GATGGTGCGG ATGCAGGCAC TACGTTGCCA GGGGTTGCGT
GCGAAGGGAC ACGGTAATAT CCGCGGGCTG ACGGTTGGAC GTACATTCCA TCTGACCGAT
CACCCGTACC AGAAATCGAA CCAGGAATAT CTGGTTGTAT CTGCAACATT GACGATTGAG
GAAAACGATC AGGCCAGCGG CACCGGCCAG GCGTTTCGCT GCGAGACGGA TTTCGAAATC
CAGCCCACGC GTGAATATTT CCGCATGCCG CACAAAACGC CCTGGCCATC CCAGGCGGGT
TTCGAGTACG CCATCGTCAC CGGCCCGGAA AATCAGGAAA TATGGACCGA TGTGTACGGT
CGTGTGAAGT GCCAACTGAT ACCCGACCGC GAAGGCAAGC TGGATCAGGA CGCCTTTATA
TGGGTATTAC CCATGCAGCC GTGGCAAAAC GGCCAGATGG GATCCGCCTT TGTGCCGCGC
ATTGGCAGCC AGGTGTTAAT CGGCTATGTG AACGGAAATC CCGACATGCC GTTCATTGTT
GCGAGCAGCG CAAACAAGCG CAACACGCCG GGATGGAAAC TGCCGTTTAA CCAGTGGGTA
TCTGGATTCC GTAGTCGAAT GGAAGGCGGC CACAGCGCCA ACCATCTCGC GCTGGTTGAT
ACGAAGAACG AACTTCAGGC GCAACTCTCG AGCGATCATG GCACAAGTCA GTTAAGCCTC
GGCTTTATTC GCCGCCTCCT AGGTAACGAG GGGCTAAAGG ATGCTCGCGG GGAAGGCTTT
GACCTGCGCA CCGATTTTTG GGGTTCGGTG CGCGCCGCGA TGGGCATCTT TATCACGACG
CACGGGCGCC CCAATGCAGA AGGGAAGGCC AAGGATGCGG GCGAAACTGT CACCCGTCTG
ACGCAGGCGC GCGACATGCA CGAGGGGCTG GTGGGGCTCG CGCAGCAGCA CGGCGCACAG
ATACCCGACG CAGACCAGAG TGACGTAACG CGCTCCATCA AGCAGCAGAC CGCCGACCTT
CGCGGCACAG CAAAGGGCGG CCCCAATGAT TTCCCCGAGT TTGCCACTCC GCTTATCGCG
CTTTCGAGTC CCGCAGGCAT TGGAACTTCC ACGGCGGGCA GTACGCATAT CCAGAGTGAC
GAGGACACTG CCATCACGAC TGGGCGCAGC ATCGGCATTG CGGCGGGCAA GTCGTTTCAC
GCTTCGGTGC TCGAAAGGAT TTCGCTGTTC GTGCGCAAGG CGGGCATGAT GCTTGTCGCC
GCATCGGGAA AAATCCGCAT CGAGGCCCAG GGCGACGACA TCGACGTAAT AGCGAAGAAA
GACGTTCAAA TCACGAGCGA GGATGGCTGG ATCAATCTGA CCGCCATGAA GGGCATACGC
TTTAACGGCG CGGGAACGAC CGTTGAACTG AGCGCTGCCG GATTGCTTGG CGCTACGAAT
GGGAAATTTC TCGTTCACGC CGCCGACCAT TCAACCGACG GCCCGCGGTC CACGCCTCCT
GCGTTCGCGC CGAAGACGTA CACCGACAAG TCGTCACTGT CGCATCTGTA TCACGACGGC
GAACCGGTCC AGGGTGCGAA GTTCGACATT CGTTACGACG ATGGCAAACG CTACAGCGGC
ACGCTTGACA ACGCGGGGCA CGCCGATCTG AGTAGCGCGC CTGTCGGTGC CGGCAGGATG
AAGATCGGGC CGGATTCGCG CCCGGTGCAG GTCAAGGCCA ATGAACCAAA TCCCGACTAC
AAGCCGAAGT GGGGTGAAAG CGATTTCCGT GCATCCGCAA ACAAGCAGAA CAACGGTGAC
GCATGA
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| Protein sequence | MKDERFPFLY RAPARTLSIS GDALPTWTPP RVNIKFEESP KPVLIPIYLH GREAIGELFS
YTVRMRTDID IPSFPDNTTI DLDSIVGTQV TIFIDVPGKA TPIPGMPGDT GRGNIGFYTR
EITGRVSAAR FVRRDGRSMV YEFEVEPALA EAAKGSNYRI FMGETVTDVI GKILGNYPIA
IDWRIGGPHY GKRVYPRRDL IRQHWEADMT SVQRLCEHYG LFYWFEHENG FHRIVIADTM
GAFHPHGEAY EQIRFSTNDR IDEEHVDRLD VTSRQTEGKI TVVDHDYTEP RVAPSTVPLR
EDFRDPRDTA RADQEVYTYA NVSQPRLEEA RFDSTPEDTR DDARNVAMVR MQALRCQGLR
AKGHGNIRGL TVGRTFHLTD HPYQKSNQEY LVVSATLTIE ENDQASGTGQ AFRCETDFEI
QPTREYFRMP HKTPWPSQAG FEYAIVTGPE NQEIWTDVYG RVKCQLIPDR EGKLDQDAFI
WVLPMQPWQN GQMGSAFVPR IGSQVLIGYV NGNPDMPFIV ASSANKRNTP GWKLPFNQWV
SGFRSRMEGG HSANHLALVD TKNELQAQLS SDHGTSQLSL GFIRRLLGNE GLKDARGEGF
DLRTDFWGSV RAAMGIFITT HGRPNAEGKA KDAGETVTRL TQARDMHEGL VGLAQQHGAQ
IPDADQSDVT RSIKQQTADL RGTAKGGPND FPEFATPLIA LSSPAGIGTS TAGSTHIQSD
EDTAITTGRS IGIAAGKSFH ASVLERISLF VRKAGMMLVA ASGKIRIEAQ GDDIDVIAKK
DVQITSEDGW INLTAMKGIR FNGAGTTVEL SAAGLLGATN GKFLVHAADH STDGPRSTPP
AFAPKTYTDK SSLSHLYHDG EPVQGAKFDI RYDDGKRYSG TLDNAGHADL SSAPVGAGRM
KIGPDSRPVQ VKANEPNPDY KPKWGESDFR ASANKQNNGD A
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