| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3611 |
|---|
| Symbol | |
|---|
| ID | 6245157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 558958 |
|---|
| End bp | 560070 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595384 |
|---|
| Product | porin |
|---|
| Protein accession | YP_001859796 |
|---|
| Protein GI | 186472454 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTT CCACCCGGCT TGCCGCGCTG CTCGCGTTTG CCTGTCCTGC CGCCTTCGCG
CAAAACAGCG TGACGCTCTA TGGCCGCATC GATGGCGGCA TCCAGTATCT GAACCACATC
GCCACGCCTT CGGGCGGCAG CACCTCCAGT TGGACCGCGG AAGGCGGCGA CTGGGGCACC
AGCATGCTGG GTTTCAAGGG ATCGGAAGAT CTCGGCGGCG GGATGTCTTC GGTATTCGAT
CTGGAGACGG CATTTCAGGT GATGAACGGC ACGACGGGCG GCGGCCGGCT GTTCTCGCGT
CGCGCCTATG TCGGACTCGC CGATAAACGC TTCGGCCAGA TTCAGGCGGG CCGCAATCTG
TTCATCGATA GCGATGGCGT GTGGGAATTC GATCCATTCG TGCAGCAGGC GTTCGCGTCG
GCCTCGCTCG TGCGCGGCCG CAACTGGCAG CAGACGAGCA ATAACGTCGA GTATCACAGC
CCCGTGTTTT ACGGTTTCGA CGTGCAAGGG CAATACGCAT TCGGCAATCA GGCTGACGGA
TTCAACCACG GCGCACCCGG CGAGTTCGGC CGTTCGGACG GCATCATGCT GACTTATCAC
TCGGACCTGT TCGACGTGCG CGGCATCTAC GACGAACTGC GCGACGTGAA CGGCCGCATG
ACGAACGTCT TCACGAGTTC GCGCGAGTAC TTCGTCGGTG CGAATGTGCG CGTGTCGAGT
GTGAAGATTC AGGGCGCCTA TACGCACCTT TCCGCGCCCG ACACACCCGC GGGCCAGGCC
GATAGCGCCG ACTACTACTG GCTCGGCGCA ACATGGGACG CAACGCATCA ACTGGCCGTG
ACGGCGGCCG CGTTCTATGT GCATCTGGGC GAAGGCGCGG GCGACGCCGC GCACGATCCC
GGCGGGCACG CGACGATGTT CGTGCTCGGC TCTACCTATC ATTTGAGCCA GCGCACCTTC
CTGTATGGCA CCGTCGCGTA TCTGCGCAAC AGCAGCCAGT CGAACTTCTC TCTGCTGGCG
AACGCGCGCG ATGCGTCGGG CAGCGCCAAT ACGAATCCAC TACCGGGCGA ATCGCAGACG
GGCGCGTATG TCGGCGTGAT GCACGTATTC TGA
|
|---|
| Protein sequence | MKASTRLAAL LAFACPAAFA QNSVTLYGRI DGGIQYLNHI ATPSGGSTSS WTAEGGDWGT
SMLGFKGSED LGGGMSSVFD LETAFQVMNG TTGGGRLFSR RAYVGLADKR FGQIQAGRNL
FIDSDGVWEF DPFVQQAFAS ASLVRGRNWQ QTSNNVEYHS PVFYGFDVQG QYAFGNQADG
FNHGAPGEFG RSDGIMLTYH SDLFDVRGIY DELRDVNGRM TNVFTSSREY FVGANVRVSS
VKIQGAYTHL SAPDTPAGQA DSADYYWLGA TWDATHQLAV TAAAFYVHLG EGAGDAAHDP
GGHATMFVLG STYHLSQRTF LYGTVAYLRN SSQSNFSLLA NARDASGSAN TNPLPGESQT
GAYVGVMHVF
|
|---|
| |