| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3596 |
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| Symbol | |
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| ID | 6245142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 540048 |
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| End bp | 543107 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642595369 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001859781 |
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| Protein GI | 186472439 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.104516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGGC CACTACGGTT TCCGTTACGC GCAATCGGCA CCACTTCTGT CTGGAAGTGG
TTCAAGTGGC TCTTTTTCGC CGCGTTTCTC GTCGCTGTTG CCTTCGGCGT GCGCTTTCTC
CAGATCGAGA TGGACACGTC GCGATTGCAG GCGCGCTACC TGTCCGAACT CACGCGCGAC
GTCGGCTTCA CCGTATCGGA AGGGCCCAGC GACAACATCC GTTTTCCTAC CGACGGACCT
TACGACATCC GCCTCGGCTA CGCGCTGCTA CCCGCTTTCG AGCGCCGTCT GAAAGAGCGC
GGCTTTGCCG TGGCCTCGCA GGCGCGCGAT TCGGAACGCA TGGCGTCACT CGCCGACGAC
GGCCTTTTCA TTCCTTACGA TGAAAAGGAT CAGGCTGGCC TGACGCTCTA TGACGCGACG
GGCACGCGCC TGTTCGGCGC GCAATATCCC GCGCGCGTGT ATGACGATTT CGAGGCGGTG
CCGCCCCTCG TCGTGTCGGC GCTACTGTTC ATCGAAGACC GCCATCTGCT CGATAGCGAC
CAGCCGAACC GTAATCCTGC GATCGACTGG GGGCGCTTCA GCCGTGCGCT GATGGATCAG
GGGCTGCGGG TTTTCAACCA TACCCAGCCG CAGCCAGGCG GCAGCACGCT CGCCACGCAG
ATCGAGAAAT TCCGCCATTC GCCCGGCGGC CGCACTGCGA CGCCAAAGGA AAAGCTCCGG
CAGATCGCGT CGGCGTCCGT GCGCGCCTAT CTCGACGGTC CGCGCACGAT GCCCGCACGC
GAGCAGATAG TGGTGCGCTA CCTGAATTCG GTGCCGCTCG CCGCCCAGCC AGGCATCGGC
GAAGTGAACG GCATCGGCGA TGGACTTGCC GCCTGGTACG GCCGCGACTT CGCAGAAGTG
AACCGCGTGC TGAAAGCGCC GCCGACGCCC GAGAATCTTC CTGAGCAGGG GCTTGCATTC
CGTCAGGTGC TGTCGCTGAT GATCGCGCAG CGCGGACCGT CGCATTTTCT GCTGCGCAAG
AACGATGAAC TCAATGCTCT GACGGAAAGC TATCTGCGGA TCTTCGCGAC GAATGGCGTG
ATCACGCCGC AACTGCGCGA CGCCGCGCTC GCGCAACAAC TCGTGCTGAC ACGCGCGAAG
GTCGCGACGC CCGAAGGCTC GTTCATCGAG CGCAAAGCGG TGACGTCGTT GCGCACGCAT
CTGCTGTCGT CGCTCGGCGT GTCGAATCTG TACGACCTCG ACCGGCTCGA CGTTCGCGTG
ACGTCGACGA TGAACAACCA GGTTCAGCAG GCCATCAGTG ATCGTCTCGC CGCCGCCACG
ACCAAGGACG GCGCGCAAGC AGCGGGGCTT TATGGCTTCA ACATGCTGCA GCCGAAGGAC
GACCCGTCGA AGATCGCGTT CAGCTTCACG CTGTTCGAAA AGCGCGACGG CGTGAACCTG
TTGCGCGTGC AGACGGATAG CGTCAACCGC CCGTTCGATA TCAATTCCGG CGCGCGCTTG
AATCTCGGTT CGACGGCGAA GTTGCGCACG ATCATCACGT ATCTGCAGAT CATGTCGGAA
CTGCATGCGC GCTATGGCCA GATGAGCGTC GATGAACTGC GCGCCGTGAA GCCCGAGCGC
GAAGACGCCT TGACGCGCTG GGCGGTCGAC TATTTCATGC ACACCAACGA CCGCTCGCTT
CCGGCGATGC TCGATGCGTC GGTGGAGCGC AAGTATTCGG CAAATGCGGG CGAAACCTTT
TTCACGGGAG GCGGCGCACA GACCTTCACG AACTTCGAAG CCGACGAGAA CTCGCGCATC
CTCACGGTGC ATCAGGCTTT CCAGCATTCG GTGAATCTGG TGTTCGTGCG GATCATGCGC
GACATCGTCC ACTATGAAAC GATCAAGACG TCTGGCCCGT CATCGCAATG GCTCAGCGAT
CCTGATACGC GCAAGATGTA CCTGACGCGC TTCGCCGATC AGGAAAGCCG CGTGTACATG
AATCGCTTCT ACACGAAGTA TCACGGCAAG ACTCAGGACG AGATGCTTGC CGTTCTTCTG
CGCGGCGTAC GCAAGTCGCC TCCGAAAGTT GCGACCGTCC TGCGCAGCGT GCGGCCCGAT
GCACCGCAGG CGTGGTTCAA CAGCCAGATG CGCGCCGCAC TGAAGAACAC GCCGAAAGCG
AATCCGCCTG ACGACGCGCT CGCGGAGCTC TATGCGAAGT ATGCGATCGA TAAATTCAAC
CTGAACGACC GCGCATACAT TTCTAGCGTG CATCCGCTGG AACTGTGGCT CGTCAATTAT
CTACGCGAGC GTCCCGAGGC AAGTGCGAAC GACGTGATGG AGGCTAGCCG CGAGGTGCGC
GCCGATGCAT ACAAGTGGCT CTTCAAGACG CGCTATCACG CGACGCAGGA TCGTCGCATT
CGCCGCATGG TCGAGCAGCA TGCGTACGAT GCGATCGGCA AATCGTGGCA GGCGCTTGGC
TATCCGTTTG CGCATCTGAC GCCTTCGTAT GCGGCGGCGA TCGGTGCATC GGGGGACCGG
CCCGCAGCGC TGGCCCAGTT GATCGGCGTG ATTGCGAACA AGGGGAATCA GGCGCCGACG
CAGAGCTTGA GTGAGCTTGA GTTTGCGAAG GGCACGCCGT ACGAGACGCG CTTCGTGCGC
GCGACGCCGC AGCCGAACGA GGCGATTTCG CCTGAGATTG CGCGGGTCGC GCAAGCCATG
ATGCGCGATG TCGTCGCTGG GGGAACGGCT AAGCGCCTTG CTGGTGGGAT GACGTTTCCG
AATGGGACGA CGCTTGAGGT CTATGGCAAG ACGGGGACTG GCGATCAGCG GCTCAATATC
TATGCGAAGG GGCGGCGTCT GATCGAGTCG CGCAAGGTTA ATCGTACGGC GACTTTTGTC
TTTGCTATCG GCGATCGGTT TTTTGGCACC TTGACTGCCG TCGTGCATGA GCCTTATGCC
AAGCGGTATG ACTTCACCAG CGCCCTTGCA GTGCAATTGC TGAAGTCGAT GGCTGCTGAA
TTGCAGCCCT TACTGGATCC GTCTACCGAT GCGGGTGGCA GTACCACTGC GTCCCGATAG
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| Protein sequence | MNRPLRFPLR AIGTTSVWKW FKWLFFAAFL VAVAFGVRFL QIEMDTSRLQ ARYLSELTRD
VGFTVSEGPS DNIRFPTDGP YDIRLGYALL PAFERRLKER GFAVASQARD SERMASLADD
GLFIPYDEKD QAGLTLYDAT GTRLFGAQYP ARVYDDFEAV PPLVVSALLF IEDRHLLDSD
QPNRNPAIDW GRFSRALMDQ GLRVFNHTQP QPGGSTLATQ IEKFRHSPGG RTATPKEKLR
QIASASVRAY LDGPRTMPAR EQIVVRYLNS VPLAAQPGIG EVNGIGDGLA AWYGRDFAEV
NRVLKAPPTP ENLPEQGLAF RQVLSLMIAQ RGPSHFLLRK NDELNALTES YLRIFATNGV
ITPQLRDAAL AQQLVLTRAK VATPEGSFIE RKAVTSLRTH LLSSLGVSNL YDLDRLDVRV
TSTMNNQVQQ AISDRLAAAT TKDGAQAAGL YGFNMLQPKD DPSKIAFSFT LFEKRDGVNL
LRVQTDSVNR PFDINSGARL NLGSTAKLRT IITYLQIMSE LHARYGQMSV DELRAVKPER
EDALTRWAVD YFMHTNDRSL PAMLDASVER KYSANAGETF FTGGGAQTFT NFEADENSRI
LTVHQAFQHS VNLVFVRIMR DIVHYETIKT SGPSSQWLSD PDTRKMYLTR FADQESRVYM
NRFYTKYHGK TQDEMLAVLL RGVRKSPPKV ATVLRSVRPD APQAWFNSQM RAALKNTPKA
NPPDDALAEL YAKYAIDKFN LNDRAYISSV HPLELWLVNY LRERPEASAN DVMEASREVR
ADAYKWLFKT RYHATQDRRI RRMVEQHAYD AIGKSWQALG YPFAHLTPSY AAAIGASGDR
PAALAQLIGV IANKGNQAPT QSLSELEFAK GTPYETRFVR ATPQPNEAIS PEIARVAQAM
MRDVVAGGTA KRLAGGMTFP NGTTLEVYGK TGTGDQRLNI YAKGRRLIES RKVNRTATFV
FAIGDRFFGT LTAVVHEPYA KRYDFTSALA VQLLKSMAAE LQPLLDPSTD AGGSTTASR
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