| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3595 |
|---|
| Symbol | |
|---|
| ID | 6245141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 538711 |
|---|
| End bp | 539961 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595368 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_001859780 |
|---|
| Protein GI | 186472438 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.227419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA CTAGCCAGAA GACGTCGATG GATACGGGCA CTCGCTCACC GCTCAAACGC
ACAGTCGGCT CGAACCAGGT CGGCATGCGG CAGTTCAACG AACGCATCGT GCTGCAGGCG
ATCCGTTTGC ATGGACCTCT GCCGAAGGCC GACGTGGGAC GGCTCACGCG CCTGTCGATG
CAGACCGTGT CGATGATCGT CGAGCGGCTG ATCGACGACG GCCTGCTCGA AAAACAGGCG
CGCGTGCGCG GACGCATCGG CCAGCCGTCC GTGCCCATCG CGTTGCGTGC GGAAGGCGCT
TATACGATCG GCGTGAAGGT CGGGCGGCGC AGTCTCGATG TGCTCGCGAT GGATTTTCTG
GGCCGCGTGT GTTGCCGCGA AGTGCAGGAA TACGCGTATC CCGACCCGCG CACGCTGTTC
GCGTCGCTCG ACAGCAAGCT CGCGCGTATC AACGATGCGC TCGGCGCGCG GCGTGAGAAA
GTGGTCGGCA TGGGCGTCGC CGCGCCGCTC TGGCTCGGGG GTTGGCGGGA TTTTCTCGGC
GCGCCGCCTG AAGCGCTCGA CGCATGGAAC GACATCGACA TTCGCACGCG CATTGCTTCG
ATGACGGGCT TGCCCGTCGA GTTCGCGAAG GACACAACGG CTGCTTGTGC CGCCGAGCTC
GTGATGGGTC AGGGGCGCGG CATCCATAAC TTTCTGTATC TGTTCGTCGG CACGTTTATC
GGCGGCGGGC TGGTGATCGA TGGGCGCCTG CACGGCGGCC CGCACGATAA CGCCGGCGCT
GTCGGCTCGA TTCCGATCAT GAGCGGCAAC GCGCGGCGGC CGGCGCGGCA GTTGCTGCAT
GCGGCGTCCG GCTTCGTGCT CGAGAAACTG TTGGTCGATG CGGGCGCGCC GGCTGCCGCG
GCGCATGATC ATCGCGCGTT ATCGGCTGAC CTATGGCGGC TTACCGAGCA GTGGCTCGAT
ACCGCCTGTC CTGCCATTGC TGGCGCGCTG ACCAATGCCG CCGCTTTGCT CGATCTCGAG
GCCGTCGTTA TCGACGGTGA AGTTGATCGT CAGTTGGTTC GCGAGATTAT TCGCCGCACC
GAGCGGGTGC TTGATTCGTT CGAGTGGGAA GGGATTGTGA GGCCGCAATT GCTCGAAGGC
ACTATTGGCG CCGATGCGCG GGCGATGGGA GGCGCGATTT TGCCTTTATA TGCGCACTTC
GCGCCTGTGC ATGAGCTTTT TCTCAAACCC GCGGAGGGTG TGATGGCGTG A
|
|---|
| Protein sequence | MSTTSQKTSM DTGTRSPLKR TVGSNQVGMR QFNERIVLQA IRLHGPLPKA DVGRLTRLSM
QTVSMIVERL IDDGLLEKQA RVRGRIGQPS VPIALRAEGA YTIGVKVGRR SLDVLAMDFL
GRVCCREVQE YAYPDPRTLF ASLDSKLARI NDALGARREK VVGMGVAAPL WLGGWRDFLG
APPEALDAWN DIDIRTRIAS MTGLPVEFAK DTTAACAAEL VMGQGRGIHN FLYLFVGTFI
GGGLVIDGRL HGGPHDNAGA VGSIPIMSGN ARRPARQLLH AASGFVLEKL LVDAGAPAAA
AHDHRALSAD LWRLTEQWLD TACPAIAGAL TNAAALLDLE AVVIDGEVDR QLVREIIRRT
ERVLDSFEWE GIVRPQLLEG TIGADARAMG GAILPLYAHF APVHELFLKP AEGVMA
|
|---|
| |