| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3577 |
|---|
| Symbol | |
|---|
| ID | 6245123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 521338 |
|---|
| End bp | 521745 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595350 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001859762 |
|---|
| Protein GI | 186472420 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.725686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCC ATCCTCTACG CCTTCAGCCC GGACAAGACC TGCGCGACGC ACTCGAACAC
ACGATGCACC CGGTGGGCGC GACGGCAGTG TTCGTCGTTC AGGGCATCGG CAGCCTCAGC
GTCGCGCGAT TGCGTTTCGC CGGTGTCGAG CATCCCACGG AACTGCGCGC CGATCTGGAG
ATCCTCACCC TGGCAGGAAC CGTTGCGCGC AACGGCGCGC ATCTGCATAT GTCCGTGTCT
GGCCCGGACG GCCGCGTGTT CGGCGGACAT GTCGCGCACG GCTGCATCGT ACGAACGACC
GTTGAAATTC TGCTCGCGCT CCTGCCCGAT CATGTGTTCT CACGCGAGCC CGATCCGCAA
ACCGGCTTCA TGGAACTGTT CATCCGCAAT GCGCCGCGTC GCGCGTAG
|
|---|
| Protein sequence | MQAHPLRLQP GQDLRDALEH TMHPVGATAV FVVQGIGSLS VARLRFAGVE HPTELRADLE
ILTLAGTVAR NGAHLHMSVS GPDGRVFGGH VAHGCIVRTT VEILLALLPD HVFSREPDPQ
TGFMELFIRN APRRA
|
|---|
| |