| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3550 |
|---|
| Symbol | |
|---|
| ID | 6245097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 494485 |
|---|
| End bp | 495207 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642595324 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001859736 |
|---|
| Protein GI | 186472394 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.191512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAC GTACATTCTT GGTAACGGGC GCCAGCAAGG GTATCGGGCG GGCGTTGTCG
AACCGGCTCG CCGCCGACGG GCACCAGGTC GTCGGTCTCG CACGCGGCGC CGACGATTCA
AGTTTTCCCG GCATACTGGT TTCAGTCGAT CTGACGGATC GAAATGCGAC CGCGCGTGCG
CTCGCGGGGC TGGCCGAGCG CTACGCCTTC GATGGCGTCG TCAATAACGC GGGGTTTGTC
CGGCTCGCCG GCGTTGAAGC GATCGATCTC GACGATCTCG AAGCGTCCTT CCGTCATAAC
CTCACTTCTG CCGTGCAGAC CGTACAAGCG CTGCTGCCCG GCATGCGGAA TCGAGGGTGG
GGGCGAATCG TCAATCTCTC CAGCCTTGTC GTTCTTGGCG TGGCGAACCG CACGGCTTAC
GCTGCGGCGA AAGCCGCGAT GATGAGCTTT ACGCGCACGT GGGCGCTTGA ACTGGCACAG
ACGGGCGTCA CTGTCAATTC CGTCGCGCCT GGGCCCACCG AAACCGAACT GTTCCGGCAG
AACACGCCCG TGGGCGGCGA AGCGGAGCAG CGCTTTCTTT CGCTCGTGCC GATGAAGCGG
TTTGGCAAGC CTGACGAATT GGCCGCAGCT TTAGCATTCT TTCTGTCCGA GGATGCAGGC
TTTATCACTG GACAAACGTT ATTCGTTGAC GGTGGCGCGT CGGTGGGAAA GGCGGCGTTC
TGA
|
|---|
| Protein sequence | MFKRTFLVTG ASKGIGRALS NRLAADGHQV VGLARGADDS SFPGILVSVD LTDRNATARA
LAGLAERYAF DGVVNNAGFV RLAGVEAIDL DDLEASFRHN LTSAVQTVQA LLPGMRNRGW
GRIVNLSSLV VLGVANRTAY AAAKAAMMSF TRTWALELAQ TGVTVNSVAP GPTETELFRQ
NTPVGGEAEQ RFLSLVPMKR FGKPDELAAA LAFFLSEDAG FITGQTLFVD GGASVGKAAF
|
|---|
| |