| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3549 |
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| Symbol | |
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| ID | 6245096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 492911 |
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| End bp | 494371 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642595323 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001859735 |
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| Protein GI | 186472393 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.504224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACCCA GACACCTCCT TGCCGCAGTC ATTGTCACCA GCCTCTCGAC AGGCTGCGCG
GTTGGTCCCG ACTATGTGCG ACCGGCTGTC GCCATGCCAG ACAGCTTCCA GGGCCAAGCC
GCAGTCGATC ACCGGCAGGC GGCGGCCAGC GCCGACCTTG CCACGTGGTG GACGGGTTTC
GGCGATCCGC AGCTGACGCG GTTCGTCACG CTCGCGCTGG AACAGAACCT GGACCTCGCG
CAGGCCGCCG CGCGCGTCTC GCAGGCGCGC GCAGGACTCG GCGCGGCGAA CGCCGCGCTG
CTGCCGTCCG GCAATGTCAA CGGCCAGGCT GCGCGGGTTT ACCAGTCGGT TGAGACTCCC
TTGGGGCGGG TCCTCAATTC GACGCCCGGT TTCGACCGCT ACGGCAACGA CTATGAGGCC
AATTTCAGCG CGAGCTGGGA GCTGGATGTG TTCGGTGGCC TGCGTCGCGG ACGGGAAGCG
GCGCTTGCCG ACTATCAGGC TTCAGAGGCC GGCGAGGTGG CCACGCGCCT GGCTGTGGCA
GCGCAGACTG CGGACATCTA CATCACTATT CGTGGATTAC AGGCTCGTCT TCAGGTGGCC
CGCAAGCAGT TGCAGACGCA GCAGGATCTA CTTTCGACCA TCAAGCTTCT GTACGGGAAA
GGCCTCGCGG CCGACCTGCA GGTGAGCCAG GCTGAAGGCG CGCTGGCTCA GGTTCAGGCG
TCCATCCCGG TCCTTGAGGC AGGGCTGGAT GCGGCGATGA ACGCGCTGGA CGTGATGCTG
GGTTCACAGC CCGGCACGCA TCGGGCGGAA CTCCTCGAGG GCGGCGATAT CCCGACCGCT
CCTCAAATTG CGGGCACCGG CTCGCCGGGT ACCTTGCTCA GGCGTCGGCC CGATCTGATC
GTGGCGGAGC GGCGCCTCGC TGCATCGAAC GCGCGTATTG GCGTGGCCAT CGCAGAGTAC
TACCCCAAGG TGTCGCTCAG TGGCTTAATC GGCAGCGCTA CCTCGGTGGC CAGCGACAAC
CTGTTCAGTA GCGGTGCCAG TCAGGGCGCC GGCGTGCTGG GGCTGCGCTG GCGTCTGTTC
GATTTCGGCC GCATCAATGC GCAGATCAAG GAGGCCAAAG GGCAGGAAGC CGAGATGCTC
GCCGCCTACC GGCTTGCCGC ATTGCATGCT ACGGAGGATG TCGAGAATTC TTACTCGGCA
CTCGTCAAGC GCGAGGATCA GGCTGCCATT CTCGCGCAGG GTGTGAGCTC GCTCGGACGC
GCGCGGGCGG CCTCGTTCGC CGCTTATCAG AAGGGTGTCG TCAGCCTGAT CGAAGTGCTG
CAGGCAGACG ACAACCTCTT GCGCGCCTCG GATGGGCGGG TGCAGGCGCA AACGGAATCG
GCGCGCGCAG CGATCGCGGC ATTCAAGGCG CTCGGTGGCG GCTGGCAACC TACCGGTCCT
GAGGCCGTTG TAAGCCGATA G
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| Protein sequence | MLPRHLLAAV IVTSLSTGCA VGPDYVRPAV AMPDSFQGQA AVDHRQAAAS ADLATWWTGF
GDPQLTRFVT LALEQNLDLA QAAARVSQAR AGLGAANAAL LPSGNVNGQA ARVYQSVETP
LGRVLNSTPG FDRYGNDYEA NFSASWELDV FGGLRRGREA ALADYQASEA GEVATRLAVA
AQTADIYITI RGLQARLQVA RKQLQTQQDL LSTIKLLYGK GLAADLQVSQ AEGALAQVQA
SIPVLEAGLD AAMNALDVML GSQPGTHRAE LLEGGDIPTA PQIAGTGSPG TLLRRRPDLI
VAERRLAASN ARIGVAIAEY YPKVSLSGLI GSATSVASDN LFSSGASQGA GVLGLRWRLF
DFGRINAQIK EAKGQEAEML AAYRLAALHA TEDVENSYSA LVKREDQAAI LAQGVSSLGR
ARAASFAAYQ KGVVSLIEVL QADDNLLRAS DGRVQAQTES ARAAIAAFKA LGGGWQPTGP
EAVVSR
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