Gene Bphy_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3548 
Symbol 
ID6245095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp492217 
End bp492840 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content60% 
IMG OID642595322 
ProductTetR family transcriptional regulator 
Protein accessionYP_001859734 
Protein GI186472392 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.842454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGA AAAACACCAC CATTCCCTCT GCCCCCGCGC GCGGCCCGGC CGATCACGAG 
GTGCGGGACC AGATCGTTGC CGCGGCCACC GAGCACTTCA GCCGGTATGG CTACGATAAA
ACCACGGTCT CGGACCTCGC CAAGGCGATC GGGTTTTCCA AGGCCTACAT CTACAAGTTC
TTCGAATCCA AGCAGGCCAT TGGCGAGATG ATCTGCGGCA ACTGCCTGCA CGAGATCGAA
AGCGAGGTCA GGGCGGCCGT AGCGGACACC GATCTGCCGC CGGAGAAGCT GCGGCGGATG
TTCAAGGTCT TTACCGATGC GAGCCTCCGT CTGTTTTTCC GGGACCGCAA GCTTTACGAC
ATCGCCGCAT CGGCTGCCAC CGAAAACTGG CAGGCCGTGC AAGCTTATGA AGCACGTGTT
CAGAAACTGC TGCAGGAGGT TTTGCAGGAA GGTCGGCAAA GCGGTGACTT CGAGCGCAAG
ACGCCACTGG ACGAAACCGC GACGGCGATC TATCTGGTGC TGCGCCCCTA CCTCAACCCG
CTGCTGCTTC AGTACAACCG CGATACCACC GATGTCGCGC CGGCGCAGTT GTCCAGCCTA
GTACTTCGTA GCCTGTCGCC CTAA
 
Protein sequence
MPMKNTTIPS APARGPADHE VRDQIVAAAT EHFSRYGYDK TTVSDLAKAI GFSKAYIYKF 
FESKQAIGEM ICGNCLHEIE SEVRAAVADT DLPPEKLRRM FKVFTDASLR LFFRDRKLYD
IAASAATENW QAVQAYEARV QKLLQEVLQE GRQSGDFERK TPLDETATAI YLVLRPYLNP
LLLQYNRDTT DVAPAQLSSL VLRSLSP