| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3512 |
|---|
| Symbol | |
|---|
| ID | 6245068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 448525 |
|---|
| End bp | 449334 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642595295 |
|---|
| Product | 4-oxalocrotonate decarboxylase |
|---|
| Protein accession | YP_001859707 |
|---|
| Protein GI | 186472365 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAA CGCTCGATCA AACAGCCATC CAAGCGGCGG CCGAAGCGTT GCGTAACGCG
CGCGCAACCT GCACACCCAT CGATCCGATT TCCACTCGGT ATGGCATTTC CGGTCTTGAG
GCCGCCTACG CCGTCGCCGA AGCAAACACG ACCACGCTAA CCGATGCCGG CCGCCGGATC
GTCGGCAAGA AGATCGGCTT GACGTCGGTC GCAGTGCAGC AGCAACTGGG AGTTGACCAG
CCGGACTTTG GCGTGCTCTT TGACGATATG GAATATCTCG ACGGCGACGA AATTCCGGTG
AGCCGTCTGC TGCAACCGAA AATTGAAGCC GAAGTGGCAT TCGTTGTCGG GCGTGACATC
GATGACGAGG CACCAAGCTA CGGGCGGGTT CTGTCGTCGC TGGCCTATGC GCTCCCCGCG
CTCGAGATTG TGGACAGTGC CATCGCGGAC TGGCGGATCA CGCTTGAGGA CACGGTCGCG
GACAACGCGT CTTGCGGTCT GTACGTACTC GGACACCAGC CGGTCGCTCT TGGTCAGCTG
TCGCTCGATG AGCTTGGCAT GTCGATGACC CGCCATGGAA AGATCGTGTC CACCGGAAGC
GGCGCAGCCT GTCTGGGCCA CCCGCTGCGT GCTGTGTACT GGCTGGCATG CACGATGGGG
CGACGCGGCA AAAAGTTGCG AGCGGGCGAC GTCATCCTCT CAGGCGCTCT GGGCGCGATG
GTTCCCCTTG GCCGGGCAGA CGCTATTCAC GCGCAGATTG GCGCACTCGG CAGCGTGAGT
TGCCGCATCG CAGGAGGAGA GGATCGATGA
|
|---|
| Protein sequence | MTQTLDQTAI QAAAEALRNA RATCTPIDPI STRYGISGLE AAYAVAEANT TTLTDAGRRI
VGKKIGLTSV AVQQQLGVDQ PDFGVLFDDM EYLDGDEIPV SRLLQPKIEA EVAFVVGRDI
DDEAPSYGRV LSSLAYALPA LEIVDSAIAD WRITLEDTVA DNASCGLYVL GHQPVALGQL
SLDELGMSMT RHGKIVSTGS GAACLGHPLR AVYWLACTMG RRGKKLRAGD VILSGALGAM
VPLGRADAIH AQIGALGSVS CRIAGGEDR
|
|---|
| |