| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3493 |
|---|
| Symbol | |
|---|
| ID | 6245049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 425910 |
|---|
| End bp | 426545 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642595276 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001859688 |
|---|
| Protein GI | 186472346 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.729173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.75311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGAA CGAAGCAACA GGCGCTCGAC ACGCGGGCGA AGATCATCGA AGCCGCCGAG
CGCGTGATCT ACGTGCGCGG CTTCGCGCGC GCGTCGCTGG AAGACATTGC GTCTGAAGCG
GGCGTCACGC GCGGCGCGGT GTATGGGCAC TTCAGAAACA AGGAGGCCGT GTTTCAGGCG
ATCTACGAGA ACGCGGACAT GCCGCTCGAT CCCTTTGTCG TGCAAGCCTG CGAACAGGAC
GCGGACCCGT TGCAGCATCT GCATGCGCAA CTGCGCCAGC GCCTGCGCGA CGCGTTGCAC
ATGCGGCGCG CGCGGCGTCT GTACAGCATC GCACTGACGA AGCGCGAGGT GACGGCGGAG
ACGGCGGCAT TTTACGAGCG GGTATCGATG GCCTCGTTGC GCGCCGAAGC ACAGATCGAC
GCCGCCTTAC GCGCCGCGTC CGAACGTGGA CAGTTGCCGC CCGGCGTCGA CACGCGCGCC
GCCGCCGGAT TCATTCACGC AGCGCTGACG GGCTTTCTGC ACAAGCGACT GTTGATGTCG
GGCGAACCGC GCGTGGATGG AGAAGCGGAC CAGACGCTGG CGTCGGCGTT GCGATGTATC
GGGGCTCAGA CTGGGTTCGA GCCGGCCCGC GTCTGA
|
|---|
| Protein sequence | MGRTKQQALD TRAKIIEAAE RVIYVRGFAR ASLEDIASEA GVTRGAVYGH FRNKEAVFQA
IYENADMPLD PFVVQACEQD ADPLQHLHAQ LRQRLRDALH MRRARRLYSI ALTKREVTAE
TAAFYERVSM ASLRAEAQID AALRAASERG QLPPGVDTRA AAGFIHAALT GFLHKRLLMS
GEPRVDGEAD QTLASALRCI GAQTGFEPAR V
|
|---|
| |